Gene detail information of Glyur000569s00020981 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54520.1 | 1.00E-102 | |
| NR | XP_004494678.1 | 0 | PREDICTED: uncharacterized protein LOC101495636 [Cicer arietinum] |
| COG | YP_007089950.1 | 4.00E-48 | hypothetical protein Chro_0535 [Chroococcidiopsis thermalis PCC 7203] |
| trEMBL | tr|G7L0U7|G7L0U7_MEDTR | 0 | Plant/F20D21-34 protein {ECO:0000313|EMBL:AES82618.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00569 | 67030 | 73391 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000569s00020981.1 | PF07466.6 | DUF1517 | 110 | 410 | 1.60E-89 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.026 |
| SRR1783600 | control | 16.135 |
| SRR1783602 | moderate drought stress | 11.325 |
| SRR1811619 | moderate drought stress | 11.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.740 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.595 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 74.327 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 71.487 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.537 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.270 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 141.071 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 140.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.761 |
| SRR2868004 | Drought Stress (root) | 10.881 |
| SRR2967015 | Control (root) | 14.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 75.307 |
| SRR9715740 | Leaf | 104.517 |
| SRR9715741 | Leaf | 85.688 |
| SRR9715739 | Root | 4.786 |
| SRR9715742 | Root | 10.351 |
| SRR9715743 | Root | 11.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.480 |
| SRR8749028 | MeJA induced 9h | 20.985 |
| SRR8749029 | MeJA induced 9h | 20.403 |
| SRR8749030 | Uninduced | 4.138 |
| SRR8749031 | Uninduced | 9.386 |
| SRR8749032 | Uninduced | 10.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.503 |
| SRR8400027 | Control - Root | 23.788 |