Gene detail information of Glyur000569s00020970.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32020.1 | 3.00E-37 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | AFK44871.1 | 2.48E-77 | unknown [Lotus japonicus] |
| COG | YP_004882909.1 | 4.00E-17 | putative acetyltransferase [Oscillibacter valericigenes Sjm18-20] |
| trEMBL | tr|I3SX79|I3SX79_LOTJA | 9.00E-78 | Uncharacterized protein {ECO:0000313|EMBL:AFK44871.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00569 | 11369 | 11909 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000569s00020970.1 | PF13302.1 | Acetyltransf_3 | 40 | 120 | 5.00E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.872 |
| SRR1783600 | control | 0.938 |
| SRR1783602 | moderate drought stress | 0.571 |
| SRR1811619 | moderate drought stress | 0.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.232 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.077 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.514 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.717 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.459 |
| SRR2868004 | Drought Stress (root) | 13.870 |
| SRR2967015 | Control (root) | 12.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.135 |
| SRR9715740 | Leaf | 0.688 |
| SRR9715741 | Leaf | 0.701 |
| SRR9715739 | Root | 0.080 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.512 |
| SRR8749028 | MeJA induced 9h | 0.874 |
| SRR8749029 | MeJA induced 9h | 0.763 |
| SRR8749030 | Uninduced | 0.943 |
| SRR8749031 | Uninduced | 0.799 |
| SRR8749032 | Uninduced | 0.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.631 |
| SRR8400027 | Control - Root | 0.391 |