Gene detail information of Glyur000568s00030996 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39790.1 | 1.00E-144 | Protein of unknown function (DUF630 and DUF632) |
| NR | XP_007159634.1 | 0 | hypothetical protein PHAVU_002G254100g [Phaseolus vulgaris] |
| trEMBL | tr|V7CQI7|V7CQI7_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW31628.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00568 | 138571 | 142940 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000568s00030996.1 | PF04783.7 | DUF630 | 1 | 59 | 4.90E-25 |
| Glyur000568s00030996.1 | PF04782.7 | DUF632 | 302 | 644 | 4.10E-96 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.497 |
| SRR1783600 | control | 4.499 |
| SRR1783602 | moderate drought stress | 3.406 |
| SRR1811619 | moderate drought stress | 3.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.681 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.725 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.765 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.742 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.792 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.846 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.381 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.292 |
| SRR2868004 | Drought Stress (root) | 2.973 |
| SRR2967015 | Control (root) | 3.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.473 |
| SRR9715740 | Leaf | 0.195 |
| SRR9715741 | Leaf | 1.438 |
| SRR9715739 | Root | 0.352 |
| SRR9715742 | Root | 1.957 |
| SRR9715743 | Root | 1.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.197 |
| SRR8749028 | MeJA induced 9h | 14.970 |
| SRR8749029 | MeJA induced 9h | 13.191 |
| SRR8749030 | Uninduced | 2.898 |
| SRR8749031 | Uninduced | 57.640 |
| SRR8749032 | Uninduced | 25.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.864 |
| SRR8400027 | Control - Root | 2.247 |