Gene detail information of Glyur000568s00030994 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65120.1 | 3.00E-27 | |
| NR | ADD09619.1 | 2.68E-92 | unknown [Trifolium repens] |
| trEMBL | tr|D3YBG8|D3YBG8_TRIRP | 1.00E-92 | Putative uncharacterized protein {ECO:0000313|EMBL:ADD09619.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00568 | 128822 | 131286 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.565 |
| SRR1783600 | control | 5.486 |
| SRR1783602 | moderate drought stress | 4.748 |
| SRR1811619 | moderate drought stress | 4.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.334 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.416 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.717 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.745 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.529 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.421 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.696 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.738 |
| SRR2868004 | Drought Stress (root) | 6.939 |
| SRR2967015 | Control (root) | 8.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.887 |
| SRR9715740 | Leaf | 2.460 |
| SRR9715741 | Leaf | 1.513 |
| SRR9715739 | Root | 3.060 |
| SRR9715742 | Root | 3.227 |
| SRR9715743 | Root | 3.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.730 |
| SRR8749028 | MeJA induced 9h | 7.772 |
| SRR8749029 | MeJA induced 9h | 5.705 |
| SRR8749030 | Uninduced | 0.506 |
| SRR8749031 | Uninduced | 0.697 |
| SRR8749032 | Uninduced | 0.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.360 |
| SRR8400027 | Control - Root | 6.974 |