Gene detail information of Glyur000568s00030993 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39780.1 | 2.00E-06 | Integrase-type DNA-binding superfamily protein |
| NR | ADD09620.1 | 2.07E-26 | dehydration responsive element binding protein [Trifolium repens] |
| Swissprot | tr|O65665|ERF60_ARATH | 5.00E-11 | Ethylene-responsive transcription factor ERF060 |
| trEMBL | tr|D3YBG9|D3YBG9_TRIRP | 8.00E-27 | Dehydration responsive element binding protein {ECO:0000313|EMBL:ADD09620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00568 | 114165 | 115124 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.474 |
| SRR1783600 | control | 5.600 |
| SRR1783602 | moderate drought stress | 8.625 |
| SRR1811619 | moderate drought stress | 8.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 270.718 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 253.250 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.744 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.620 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 272.981 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 271.622 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 57.407 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 60.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.623 |
| SRR2868004 | Drought Stress (root) | 16.779 |
| SRR2967015 | Control (root) | 36.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.227 |
| SRR9715740 | Leaf | 14.829 |
| SRR9715741 | Leaf | 9.588 |
| SRR9715739 | Root | 11.799 |
| SRR9715742 | Root | 15.805 |
| SRR9715743 | Root | 14.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.257 |
| SRR8749028 | MeJA induced 9h | 12.022 |
| SRR8749029 | MeJA induced 9h | 9.173 |
| SRR8749030 | Uninduced | 3.305 |
| SRR8749031 | Uninduced | 3.722 |
| SRR8749032 | Uninduced | 0.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.749 |
| SRR8400027 | Control - Root | 7.979 |