Gene detail information of Glyur000568s00030984 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65170.1 | 2.00E-18 | VQ motif-containing protein |
| NR | KHN29075.1 | 1.92E-110 | hypothetical protein glysoja_008410 [Glycine soja] |
| trEMBL | tr|K7L6J7|K7L6J7_SOYBN | 4.00E-110 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G14581.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00568 | 16675 | 18093 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000568s00030984.1 | PF05678.9 | VQ | 187 | 215 | 2.00E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 59.128 |
| SRR1783600 | control | 63.979 |
| SRR1783602 | moderate drought stress | 56.797 |
| SRR1811619 | moderate drought stress | 53.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 49.741 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 50.267 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.940 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.455 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.655 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.182 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.169 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.659 |
| SRR2868004 | Drought Stress (root) | 17.576 |
| SRR2967015 | Control (root) | 21.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.545 |
| SRR9715740 | Leaf | 19.320 |
| SRR9715741 | Leaf | 36.210 |
| SRR9715739 | Root | 47.389 |
| SRR9715742 | Root | 46.856 |
| SRR9715743 | Root | 39.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.516 |
| SRR8749028 | MeJA induced 9h | 19.555 |
| SRR8749029 | MeJA induced 9h | 28.674 |
| SRR8749030 | Uninduced | 4.311 |
| SRR8749031 | Uninduced | 4.122 |
| SRR8749032 | Uninduced | 3.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.235 |
| SRR8400027 | Control - Root | 18.220 |