Gene detail information of Glyur000567s00021947 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49410.2 | 2.00E-41 | |
| NR | XP_004491568.1 | 2.20E-70 | PREDICTED: uncharacterized protein LOC101502937 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I3SVK0|I3SVK0_LOTJA | 2.00E-69 | Uncharacterized protein {ECO:0000313|EMBL:AFK44292.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00567 | 608 | 2467 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.939 |
| SRR1783600 | control | 19.294 |
| SRR1783602 | moderate drought stress | 14.893 |
| SRR1811619 | moderate drought stress | 14.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.486 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.251 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.331 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.211 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.239 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.172 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.136 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.109 |
| SRR2868004 | Drought Stress (root) | 36.745 |
| SRR2967015 | Control (root) | 31.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.439 |
| SRR9715740 | Leaf | 28.678 |
| SRR9715741 | Leaf | 21.066 |
| SRR9715739 | Root | 10.187 |
| SRR9715742 | Root | 13.465 |
| SRR9715743 | Root | 12.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 53.061 |
| SRR8749028 | MeJA induced 9h | 18.017 |
| SRR8749029 | MeJA induced 9h | 22.480 |
| SRR8749030 | Uninduced | 12.142 |
| SRR8749031 | Uninduced | 3.255 |
| SRR8749032 | Uninduced | 4.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.084 |
| SRR8400027 | Control - Root | 45.287 |