Gene detail information of Glyur000565s00025198 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007161623.1 | 6.97E-21 | hypothetical protein PHAVU_001G085000g [Phaseolus vulgaris] |
| trEMBL | tr|V7CTV5|V7CTV5_PHAVU | 3.00E-21 | Uncharacterized protein {ECO:0000313|EMBL:ESW33617.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00565 | 87890 | 90000 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.265 |
| SRR1783600 | control | 1.108 |
| SRR1783602 | moderate drought stress | 1.324 |
| SRR1811619 | moderate drought stress | 1.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.174 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.076 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.008 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.950 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.935 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.961 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.591 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.860 |
| SRR2868004 | Drought Stress (root) | 6.096 |
| SRR2967015 | Control (root) | 6.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.247 |
| SRR9715740 | Leaf | 0.742 |
| SRR9715741 | Leaf | 0.544 |
| SRR9715739 | Root | 0.299 |
| SRR9715742 | Root | 0.356 |
| SRR9715743 | Root | 1.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.337 |
| SRR8749028 | MeJA induced 9h | 7.937 |
| SRR8749029 | MeJA induced 9h | 5.055 |
| SRR8749030 | Uninduced | 4.511 |
| SRR8749031 | Uninduced | 7.135 |
| SRR8749032 | Uninduced | 5.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.791 |
| SRR8400027 | Control - Root | 3.818 |