Gene detail information of Glyur000565s00025197 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004487951.1 | 4.90E-86 | PREDICTED: uncharacterized protein LOC101495820 [Cicer arietinum] |
| trEMBL | tr|I1MGZ7|I1MGZ7_SOYBN | 9.00E-81 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G17600.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00565 | 85956 | 87664 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.990 |
| SRR1783600 | control | 2.039 |
| SRR1783602 | moderate drought stress | 4.990 |
| SRR1811619 | moderate drought stress | 4.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.976 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.437 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.868 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.866 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.701 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.717 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.650 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.439 |
| SRR2868004 | Drought Stress (root) | 18.058 |
| SRR2967015 | Control (root) | 30.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.843 |
| SRR9715740 | Leaf | 12.618 |
| SRR9715741 | Leaf | 8.143 |
| SRR9715739 | Root | 0.387 |
| SRR9715742 | Root | 1.627 |
| SRR9715743 | Root | 2.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.262 |
| SRR8749028 | MeJA induced 9h | 0.414 |
| SRR8749029 | MeJA induced 9h | 0.207 |
| SRR8749030 | Uninduced | 0.590 |
| SRR8749031 | Uninduced | 0.574 |
| SRR8749032 | Uninduced | 0.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.067 |
| SRR8400027 | Control - Root | 2.246 |