Gene detail

Gene detail information of Glyur000563s00023598.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G35940.3	7.00E-85	BEL1-like homeodomain 1
NR	XP_007132496.1	0	hypothetical protein PHAVU_011G099100g [Phaseolus vulgaris]
Swissprot	tr\|Q9SJ56\|BLH1_ARATH	2.00E-114	BEL1-like homeodomain protein 1
trEMBL	tr\|V7AGT9\|V7AGT9_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW04490.1}

Sequence

Transcript Sequence

>Glyur000563s00023598.1
GTGTTATGTCTACATATACACATATGAAGCTTATTTATTTATATTTATGCACACCAAACACAAAAATAAAACAAAGTAAATGGAAAGCCGAATTATATTGTGGAGGATGGATATAAGATGCATATATATAGGTGGTATAGCTAACACTAGGCGTGAGAGTGTACGCCAAAACAAGAAAATCACTCGGGAGCTGTCTATTATTGTCCAATAAATACAAGTAATTAGGGACGGACCCTAATTCTAATTAAATACATTAATAACTTAAATATTAATACGAAATATAAGACGGACCACACTTTTAAATCTCACCAGCCATCACTCATCCACGCCATCGATCTGTCCTTTTAAATATCATATAATATAATTTTTTTTTCCACACGCAAAATTCACTTGGAGAGAGGAGAATACACACACAGACAGCAAAGTGAACTCCAAACTCTCAAAATCTCCAACCCAACCCAACCCAACCCAATCCCTGTGAAAGCAAAAGGGTGGCTAGCTTTTTACTCCCCCGCGATGATGGACAGTTTGTCTAACGAGATAGCAGCTTTCTACCATATCCTTCTTCCTCTCCTCCCCTCCTCGCGCGCGCGCGTGTGTGTGTGGCTCATGACTTTGTTATCTACTATTAATTAATTGGGAATGGATCTGCGACTACATCGAAACTTAGCTGCTTGAAATTAACCGGATAAAAACAAGGAGTGGAGTACAGATCAAGACGCACTATAACCAAAACGATTAAGGTTTGATTGATTTGTCCCCGTGACCCATTTTGGTTTTTTGCTTGCATAGACGTTTGAGAAAAAAGAAAAGAAAAGAGTGATTATCAATCATTATTTGTTATGACAAAGCAGCTTGGTACGGACACAGAAAAAAAAAAAAGAGAGAGAGAATTTTGACAGACATGGCAACGTACTTTCATGGCGGCACTTCAGAAATCCAACAATCTGCAGAAGGGTTACAGACACTTTACCTTATGAATCCAAACTACGTACCTTACTCTGATGCGGCGCAACACCCAACGCCCAACATGCTCTTCCCCAATCCCAACACTACCACTACTGCCAGTCCTACTCCTGTTGCCCACGCGCTTAACCTCTCCAACTTCTCCCACGCGCCTACATCACTCAACCATATTCAACAACACCACCAGGTTGGGGTTACTATTCCCGCATCAAACATCCTCCGATCCGACACTCCCACCCAACGTTCCTTCCTCGGACAGCACGACCTCTCCGGTTTCCATAGCTTTGCCGCCGCCAATAATCCGCGTGTCCACTATAACCTGTGGGGCACCGTAGTAGCTGATCAAACCCCACCGTCCGCCACAGGGACAGCGACAGCGACAGCGACAACTGCCTCGTCTAACGGTTCGGAATGTGCGGTTACCGTCGCCTTGACGGCGGCAGAGTATTCTCAGAACATTGGTTTTCATAGGCCGATTCATCAGCAGGGTTTGTCACTCAGCCTTTCATCGCAACAAGCACCTTTCGGGTCGCTCTCCGGCGAGGTGGACGTTTCTCCTGCGAGCCGAGGCGGCGGCGACGATGTGAGGGTTACGGGCATGAACGGCGTTGTTTTGGGGTCAAGGTATTTGAAGGCAGCGCAGGAGCTTCTGGAGGAAGTGGTGAATGTGGGGAAGGAAATAATGTGCAGAGGGGAATCTGTGGTGGAGGGGGCTAACAGTACTAAAGAGAAGAGGAAAGCGAATATTAATGAATGGACTTCTTCTTCTGGGGTTGGTTCGAGTGGTGGAGGAGATAACGGTGGCGGAGGTAGATCACAAGGAGCTGAGTTAAGCACTGCACAGAGACAAGAGCTTCAGATGAAGAAGTCCAAGCTTGTCACCATGCTCGATGAGGTAGAGCTAAGGTACCGACAGTATCACCACCAAATGGAGATTGTGATATCATCATTTGAGCAGGCAGCGGGATTTGGGGCGGCGAGATCTTACACGGCACTTGCGTTAAAGACAATCTCGAAGCAATTCCGGTGTCTGAAAGATGCAATCTCTTCACAAATTAGGAACACGAGCAAGGCCATGGGTGAAGATGATTTCTTGGGAGCTAAGGTAGAAGGTTCGAGGCTTAGGTACGTTGATCACCATCTCCGACAACAACGGGCACTACAGCAACTGGGAATGATACAGCACAATGCTTGGAGGCCCCAACGAGGCTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTTTTTGAGCATTTCTTGCACCCCTATCCTAAGGACTCCGATAAGGTATCAAATTGGTTTATAAATGCCCGAGTTAGGCTGTGGAAACCAATGGTTGAAGAAATGTATACGGAAGAAATCAAGGAGCAAGAGCAGAATAATAATGGCTCCTCCTCCCACGACGTCAACACAAACATATCAAAAGATCAGTCGAGCAAGGAGTTATTGTGGTCATCAGCAGCAGCAGCAGCTAATAATGCTACTACACAGCAGGATCAATCATCAGGTGCCACCACAAAACTAATTAATAATGTTCTTCATTCAAAAGCAGATCAAAGCAGCTTCAACAACCAAAACACATCTCCCACTGAGATCTCGAATTCCAATAATAACTCATTCTCAACATCTCCCAATATGGGAGGAGGAGGAGGATCCTTCCAATCCCCAGGTACTAGTATCCTTTCAGTGGACATGGAAATGAAGCAGCATGGAGACACAAATATTAATAGAGAGTCCAACGCAAAGTTTGAGGTTGAAAGGCACCGCAGAGATGGCAGATACTCTTTAATGACTACTGGTAACGAAAACCATGGTGGGGGTGGTGGGGGTAATTATGGAGCATTCTCCATGGAAGATATTGGAAGGTTTAATGTCACTGATCAACAATTGGCTCCCACTCNCAGATTCCATGGGAATGGTGTGTCTCTCACTCTTGGACTTCCCCACAATGAGAACCTCCAACATGGATTTCTCTCTCATTTGGGNGGGAGGCTTGATCAGATGGGAGGTACCAATGAAAATAATGAGTTTTGTGCCATCAACAACAGTACTAATCCACCATCTTCTTCTCATTCAGGCACTACCAGTTATGATCAGAGTAGTATTGATATTGAAAACAGAAAGAGGTTTGCTGCTGCTCAGTTATTGCGGGATTTCGTTTCCTAAGAAATTGAATAATATCACTAGCTATCTATCTATGAGGGAAGTGAAAACTTTCATTTTCTGCTACTGCAATCCATGCACGAAAAAGAAAATTCAGTTCAGATGATAATTCTCTCAGCGCACGCACGCACTAACTTAGCAGAAAACTTCAGCCAGCTGCGGCTAGCTGAATTGGAGAGGCACATCCCATGAATGCTTGTACAAACCCAAGCAAAGCTATATATCCTCGCTCGCTCGTTCTGGTTAATACCGATATATATTCCCCGCATGGGAGGGAAAACTACTACATATAATGATGGAAATTAAACCAGTGTATAAGATTATAAACTTGTGGAGAAATCAGTTAGTTTAATTATGAGATTCAAGTTGAGTTGGGGATGGTATATTATGGTATTGGAAAGTATAGCCAAGTACGTAGGAGTTGAGTGATTTCTTTGGATATATATATAGAAATATACATATTAATTGAAGACAGTTGATCAGTTATGCGTTACTTTGTAAAATTAATTATGAATTACTTTGTTTCTTGTACGTACATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00563	134236	142671	+

Gene family

Gene family	subfamily
EAR motif-containing Proteins	other

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000563s00023598.1	PF07526.6	POX	224	370	5.10E-51

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	53.481
SRR1783600	control	53.439
SRR1783602	moderate drought stress	65.782
SRR1811619	moderate drought stress	65.754

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	58.832
DRR006520	Root Summer glycyrrhizin high producing strain	58.265
DRR006521	Root Winter glycyrrhizin high producing strain	25.321
DRR006522	Root Winter glycyrrhizin high producing strain	24.779
DRR006523	Root Summer glycyrrhizin low producing strain	46.229
DRR006524	Root Summer glycyrrhizin low producing strain	46.856
DRR006525	Leaf Summer glycyrrhizin high producing strain	29.272
DRR006526	Leaf Summer glycyrrhizin high producing strain	29.401

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.080
SRR2868004	Drought Stress (root)	10.129
SRR2967015	Control (root)	10.007

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	27.068
SRR9715740	Leaf	38.304
SRR9715741	Leaf	35.677
SRR9715739	Root	7.734
SRR9715742	Root	40.905
SRR9715743	Root	34.503

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.144
SRR8749029	MeJA induced 9h	0.017
SRR8749030	Uninduced	0.139
SRR8749031	Uninduced	0.021
SRR8749032	Uninduced	0.016

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	38.054
SRR8400027	Control - Root	42.398