Gene detail information of Glyur000562s00036596 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G40600.1 | 2.00E-19 | |
| NR | XP_003622312.1 | 4.30E-151 | Transcription factor GTE6 [Medicago truncatula] |
| trEMBL | tr|A0A072TY14|A0A072TY14_MEDTR | 2.00E-151 | Uncharacterized protein {ECO:0000313|EMBL:KEH22091.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00562 | 53359 | 76803 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.743 |
| SRR1783600 | control | 6.825 |
| SRR1783602 | moderate drought stress | 9.532 |
| SRR1811619 | moderate drought stress | 9.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.136 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.008 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.260 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.108 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.735 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.618 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.265 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.945 |
| SRR2868004 | Drought Stress (root) | 7.232 |
| SRR2967015 | Control (root) | 6.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.044 |
| SRR9715740 | Leaf | 9.251 |
| SRR9715741 | Leaf | 10.934 |
| SRR9715739 | Root | 1.426 |
| SRR9715742 | Root | 4.994 |
| SRR9715743 | Root | 3.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.840 |
| SRR8749028 | MeJA induced 9h | 2.931 |
| SRR8749029 | MeJA induced 9h | 3.763 |
| SRR8749030 | Uninduced | 5.026 |
| SRR8749031 | Uninduced | 6.641 |
| SRR8749032 | Uninduced | 4.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.768 |
| SRR8400027 | Control - Root | 13.928 |