Gene detail information of Glyur000560s00027502 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78110.1 | 4.00E-64 | |
| NR | XP_007136237.1 | 1.15E-139 | hypothetical protein PHAVU_009G029900g [Phaseolus vulgaris] |
| trEMBL | tr|V7AVI6|V7AVI6_PHAVU | 4.00E-140 | Uncharacterized protein {ECO:0000313|EMBL:ESW08231.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00560 | 43924 | 45000 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.048 |
| SRR1783600 | control | 8.536 |
| SRR1783602 | moderate drought stress | 3.997 |
| SRR1811619 | moderate drought stress | 4.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.258 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.705 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.757 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.040 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.045 |
| SRR2868004 | Drought Stress (root) | 19.405 |
| SRR2967015 | Control (root) | 14.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.399 |
| SRR9715740 | Leaf | 0.296 |
| SRR9715741 | Leaf | 0.330 |
| SRR9715739 | Root | 0.348 |
| SRR9715742 | Root | 1.211 |
| SRR9715743 | Root | 0.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.066 |
| SRR8749028 | MeJA induced 9h | 0.249 |
| SRR8749029 | MeJA induced 9h | 0.226 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.248 |
| SRR8400027 | Control - Root | 13.256 |