Gene detail information of Glyur000559s00020521 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12320.1 | 7.00E-19 | |
| NR | KHN37712.1 | 2.18E-145 | hypothetical protein glysoja_007415 [Glycine soja] |
| trEMBL | tr|I1M0M5|I1M0M5_SOYBN | 1.00E-145 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G26110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00559 | 55612 | 59955 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.666 |
| SRR1783600 | control | 3.584 |
| SRR1783602 | moderate drought stress | 10.646 |
| SRR1811619 | moderate drought stress | 10.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.179 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.077 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 125.161 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 123.183 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.604 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.545 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.862 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.805 |
| SRR2868004 | Drought Stress (root) | 52.441 |
| SRR2967015 | Control (root) | 21.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 81.730 |
| SRR9715740 | Leaf | 75.233 |
| SRR9715741 | Leaf | 116.861 |
| SRR9715739 | Root | 2.504 |
| SRR9715742 | Root | 17.218 |
| SRR9715743 | Root | 14.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.449 |
| SRR8749028 | MeJA induced 9h | 52.090 |
| SRR8749029 | MeJA induced 9h | 27.328 |
| SRR8749030 | Uninduced | 29.725 |
| SRR8749031 | Uninduced | 39.699 |
| SRR8749032 | Uninduced | 34.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.183 |
| SRR8400027 | Control - Root | 10.110 |