Gene detail information of Glyur000558s00030271 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH35470.1 | 4.51E-24 | transmembrane protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072VBC0|A0A072VBC0_MEDTR | 2.00E-24 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH35470.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00558 | 86610 | 91233 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.131 |
| SRR1783600 | control | 6.850 |
| SRR1783602 | moderate drought stress | 16.159 |
| SRR1811619 | moderate drought stress | 14.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.158 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.473 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 98.029 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 101.046 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.920 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.193 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.372 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.979 |
| SRR2868004 | Drought Stress (root) | 4.609 |
| SRR2967015 | Control (root) | 8.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.891 |
| SRR9715740 | Leaf | 1.526 |
| SRR9715741 | Leaf | 1.619 |
| SRR9715739 | Root | 4.232 |
| SRR9715742 | Root | 1.195 |
| SRR9715743 | Root | 1.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.885 |
| SRR8749028 | MeJA induced 9h | 4.823 |
| SRR8749029 | MeJA induced 9h | 3.422 |
| SRR8749030 | Uninduced | 2.549 |
| SRR8749031 | Uninduced | 5.372 |
| SRR8749032 | Uninduced | 3.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.002 |
| SRR8400027 | Control - Root | 3.011 |