Gene detail information of Glyur000557s00018786 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AFK38617.1 | 6.11E-58 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SEC5|I3SEC5_LOTJA | 2.00E-58 | Uncharacterized protein {ECO:0000313|EMBL:AFK38617.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00557 | 60218 | 60736 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.139 |
| SRR1783600 | control | 3.088 |
| SRR1783602 | moderate drought stress | 4.711 |
| SRR1811619 | moderate drought stress | 4.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.823 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.410 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.215 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.210 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 46.944 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 47.087 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.850 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.071 |
| SRR2868004 | Drought Stress (root) | 3.249 |
| SRR2967015 | Control (root) | 3.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.662 |
| SRR9715740 | Leaf | 7.219 |
| SRR9715741 | Leaf | 8.449 |
| SRR9715739 | Root | 9.067 |
| SRR9715742 | Root | 9.790 |
| SRR9715743 | Root | 10.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.083 |
| SRR8749028 | MeJA induced 9h | 1.417 |
| SRR8749029 | MeJA induced 9h | 1.875 |
| SRR8749030 | Uninduced | 0.115 |
| SRR8749031 | Uninduced | 0.505 |
| SRR8749032 | Uninduced | 1.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.940 |
| SRR8400027 | Control - Root | 6.605 |