Gene detail information of Glyur000556s00025904 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44260.1 | 0 | Plant protein of unknown function (DUF946) |
| NR | XP_003595842.1 | 0 | hypothetical protein MTR_2g062430 [Medicago truncatula] |
| trEMBL | tr|A2Q3A8|A2Q3A8_MEDTR | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:ABN08108.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00556 | 78158 | 83528 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000556s00025904.1 | PF06101.6 | DUF946 | 46 | 586 | 3.20E-257 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.004 |
| SRR1783600 | control | 41.224 |
| SRR1783602 | moderate drought stress | 11.966 |
| SRR1811619 | moderate drought stress | 11.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.926 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.452 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.599 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.647 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.273 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.300 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.684 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 45.541 |
| SRR2868004 | Drought Stress (root) | 28.252 |
| SRR2967015 | Control (root) | 25.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.096 |
| SRR9715740 | Leaf | 3.426 |
| SRR9715741 | Leaf | 4.565 |
| SRR9715739 | Root | 6.433 |
| SRR9715742 | Root | 12.809 |
| SRR9715743 | Root | 10.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.631 |
| SRR8749028 | MeJA induced 9h | 48.770 |
| SRR8749029 | MeJA induced 9h | 23.377 |
| SRR8749030 | Uninduced | 10.887 |
| SRR8749031 | Uninduced | 2.615 |
| SRR8749032 | Uninduced | 5.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.357 |
| SRR8400027 | Control - Root | 38.641 |