Gene detail information of Glyur000555s00023349 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G03070.2 | 1.00E-18 | Bax inhibitor-1 family protein |
| NR | XP_002300819.1 | 5.55E-20 | hypothetical protein POPTR_0002s04980g [Populus trichocarpa] |
| Swissprot | tr|Q94A20|BI1L_ARATH | 3.00E-16 | BI1-like protein |
| trEMBL | tr|B9GSJ5|B9GSJ5_POPTR | 2.00E-20 | Uncharacterized protein {ECO:0000313|EMBL:EEE80092.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00555 | 122161 | 124327 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000555s00023349.1 | PF01027.15 | Bax1-I | 58 | 110 | 7.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.727 |
| SRR1783600 | control | 13.082 |
| SRR1783602 | moderate drought stress | 32.819 |
| SRR1811619 | moderate drought stress | 36.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.098 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.347 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.875 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.062 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.341 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.805 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.742 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.696 |
| SRR2868004 | Drought Stress (root) | 0.585 |
| SRR2967015 | Control (root) | 0.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.882 |
| SRR9715740 | Leaf | 0.478 |
| SRR9715741 | Leaf | 0.956 |
| SRR9715739 | Root | 1.464 |
| SRR9715742 | Root | 1.172 |
| SRR9715743 | Root | 1.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.666 |
| SRR8749028 | MeJA induced 9h | 2.212 |
| SRR8749029 | MeJA induced 9h | 2.979 |
| SRR8749030 | Uninduced | 1.268 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.851 |
| SRR8400027 | Control - Root | 4.235 |