Gene detail

Gene detail information of Glyur000555s00023347

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G03070.2	8.00E-83	Bax inhibitor-1 family protein
NR	XP_007162464.1	4.65E-143	hypothetical protein PHAVU_001G154500g [Phaseolus vulgaris]
COG	YP_008088116.1	5.00E-17	Integral membrane protein, interacts with FtsH [Chthonomonas calidirosea T49]
Swissprot	tr\|Q94A20\|BI1L_ARATH	2.00E-83	BI1-like protein
trEMBL	tr\|V7CYI7\|V7CYI7_PHAVU	2.00E-143	Uncharacterized protein {ECO:0000313\|EMBL:ESW34458.1}

Sequence

Transcript Sequence

>Glyur000555s00023347.1
CTTATTAACATGATAATGATAATGATAATGATATATATAGTAGAGATTACGTAAGTAAAATAAAAAGTGTGAGAGTGAGAAGGAGTGGAGTGTGAGAAAGGCCATGACAAGGGGTTGCACTTTCCCTCACTACACACCTAAGAATCTGCTTTTTTTGAGGAAGCTTCGGGTAATGGAAAACATGTTCTCACTCCATCACAAGAACGGTGATAGAGGTGTCTGGAAGAATGAAGGAAAAAAAAAGGAAAAATAAAAAAGAGTGATATGATACCACAAAAAAGAGAAATAAAAATAATATTAATTAAAATTCTCGAATAAAATGAGGAGATATGAAAGTTAGGGGTTGGGTTATGCTTTGTGGAAAGGTTGAGTAATTAAGGAAAAATGTTTCGGAAAAGAGATGTGGAGAGCGGAGGAGGTGGGGAAAGACCCCTCTACCCGATGATGCTTGAGAACCCGCGACTACGATGGTCTTTCATACGCAAAGTGTACTCCATCGTGACATTTCAGTTGCTCCTCACCATTGCAGTTGCCTCCGTTGTGGTTTTCGTTCGTCCCGTTGCTCACTTCTTCGTCGGTTCCACCCAAGGCTTGGTTCTCTACATAGTCATCATCTTTGTCCCCTTCATAACGTTATGTCCCCTTTACTATTATCATCAGAAACACCCTCTCAATTACTTCCTCCTCTTAATTTTCACCGTCACTTTGGCTTTTGTCGTTGGATTGACCTGTGCCTTTGTTAGCGGGAAAGTAATTCTTGAATCTGTCATATTGACTACTGTGGTGGTGTTCGGCCTGACTCTCTACACATTTTGGGCCGCAAGGAGAGGCCACGATTTCAGCTTTTTGGGCCCCTTCTTGTTTGGAGCNGTGTTAGTTCTCCTAGTCTTTGCCTTGATTCAGATTCTCTTTCCATTGGGTAAGCTGTCATTGATGATCTATGGGTGCTTGGCATCAATCATATTTTGTGGCTACATCATATATGATACAGACAACCTCATCAAGAGATTCTCCTACGATGAGTACATCTGGGCTTCTGTCTCCTTGTATCTAGATGTCATCAACCTCTTCCTATCCCTCCTTACTGTTTTTAGAGCTGCTGATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00555	117661	119436	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000555s00023347.1	PF01027.15	Bax1-I	30	235	1.30E-42

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.010
SRR1783600	control	10.744
SRR1783602	moderate drought stress	35.622
SRR1811619	moderate drought stress	36.903

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	17.615
DRR006520	Root Summer glycyrrhizin high producing strain	18.015
DRR006521	Root Winter glycyrrhizin high producing strain	2.661
DRR006522	Root Winter glycyrrhizin high producing strain	2.818
DRR006523	Root Summer glycyrrhizin low producing strain	30.906
DRR006524	Root Summer glycyrrhizin low producing strain	30.881
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.364
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.426

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.638
SRR2868004	Drought Stress (root)	21.514
SRR2967015	Control (root)	17.379

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.637
SRR9715740	Leaf	8.417
SRR9715741	Leaf	2.320
SRR9715739	Root	2.580
SRR9715742	Root	3.256
SRR9715743	Root	2.718

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	31.065
SRR8749028	MeJA induced 9h	45.660
SRR8749029	MeJA induced 9h	36.744
SRR8749030	Uninduced	16.784
SRR8749031	Uninduced	13.141
SRR8749032	Uninduced	10.562

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.540
SRR8400027	Control - Root	12.403