Gene detail information of Glyur000554s00034503 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004495713.1 | 1.88E-10 | PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Cicer arietinum] |
| trEMBL | tr|A0A072VN71|A0A072VN71_MEDTR | 3.00E-09 | RecQ family ATP-dependent DNA helicase {ECO:0000313|EMBL:KEH43086.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00554 | 101755 | 102160 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.076 |
| SRR1783600 | control | 1.145 |
| SRR1783602 | moderate drought stress | 1.237 |
| SRR1811619 | moderate drought stress | 0.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.844 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.553 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.802 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.103 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.498 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.974 |
| SRR9715740 | Leaf | 1.132 |
| SRR9715741 | Leaf | 2.093 |
| SRR9715739 | Root | 0.041 |
| SRR9715742 | Root | 0.174 |
| SRR9715743 | Root | 0.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.047 |
| SRR8400027 | Control - Root | 2.285 |