Gene detail information of Glyur000553s00020407 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G42960.1 | 3.00E-34 | |
| NR | XP_003527290.1 | 3.50E-94 | PREDICTED: uncharacterized protein LOC100527765 [Glycine max] |
| trEMBL | tr|K7KSI0|K7KSI0_SOYBN | 1.00E-94 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G01835.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00553 | 131732 | 134847 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.878 |
| SRR1783600 | control | 42.094 |
| SRR1783602 | moderate drought stress | 32.790 |
| SRR1811619 | moderate drought stress | 33.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 50.889 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 50.153 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 36.989 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.903 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.146 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.131 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 152.730 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 152.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 87.712 |
| SRR2868004 | Drought Stress (root) | 77.809 |
| SRR2967015 | Control (root) | 65.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 126.544 |
| SRR9715740 | Leaf | 141.892 |
| SRR9715741 | Leaf | 118.580 |
| SRR9715739 | Root | 29.828 |
| SRR9715742 | Root | 36.371 |
| SRR9715743 | Root | 30.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 50.840 |
| SRR8749028 | MeJA induced 9h | 36.960 |
| SRR8749029 | MeJA induced 9h | 37.779 |
| SRR8749030 | Uninduced | 39.289 |
| SRR8749031 | Uninduced | 21.379 |
| SRR8749032 | Uninduced | 35.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 81.716 |
| SRR8400027 | Control - Root | 84.835 |