Gene detail information of Glyur000553s00020406 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39200.1 | 1.00E-116 | Seven transmembrane MLO family protein |
| NR | KEH36351.1 | 0 | seven transmembrane MLO family protein [Medicago truncatula] |
| Swissprot | tr|O49873|MLOH1_HORVU | 0 | MLO protein homolog 1 |
| trEMBL | tr|A0A072V3Z8|A0A072V3Z8_MEDTR | 0 | MLO-like protein {ECO:0000256|RuleBase:RU280816} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00553 | 123028 | 128146 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000553s00020406.1 | PF03094.10 | Mlo | 8 | 382 | 2.50E-166 |
| Glyur000553s00020406.1 | PF03094.10 | Mlo | 380 | 447 | 5.80E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.211 |
| SRR1783600 | control | 0.225 |
| SRR1783602 | moderate drought stress | 0.159 |
| SRR1811619 | moderate drought stress | 0.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.025 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.069 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.871 |
| SRR2868004 | Drought Stress (root) | 18.103 |
| SRR2967015 | Control (root) | 8.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.043 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.080 |
| SRR9715743 | Root | 0.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.040 |
| SRR8749028 | MeJA induced 9h | 0.291 |
| SRR8749029 | MeJA induced 9h | 0.167 |
| SRR8749030 | Uninduced | 0.232 |
| SRR8749031 | Uninduced | 0.203 |
| SRR8749032 | Uninduced | 0.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.726 |
| SRR8400027 | Control - Root | 1.833 |