Gene detail information of Glyur000553s00020401 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G76405.2 | 3.00E-57 | |
| NR | XP_004500837.1 | 5.57E-113 | PREDICTED: outer envelope pore protein 21, chloroplastic-like [Cicer arietinum] |
| Swissprot | tr|Q9SM57|OEP21_PEA | 2.00E-102 | Outer envelope pore protein 21, chloroplastic |
| trEMBL | tr|I3SCF5|I3SCF5_LOTJA | 3.00E-111 | Uncharacterized protein {ECO:0000313|EMBL:AFK37947.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00553 | 93164 | 95351 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.097 |
| SRR1783600 | control | 32.937 |
| SRR1783602 | moderate drought stress | 27.391 |
| SRR1811619 | moderate drought stress | 27.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.788 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.100 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.089 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.602 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.898 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.007 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 60.675 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 60.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.239 |
| SRR2868004 | Drought Stress (root) | 14.901 |
| SRR2967015 | Control (root) | 16.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.871 |
| SRR9715740 | Leaf | 36.663 |
| SRR9715741 | Leaf | 22.768 |
| SRR9715739 | Root | 3.283 |
| SRR9715742 | Root | 6.923 |
| SRR9715743 | Root | 8.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.919 |
| SRR8749028 | MeJA induced 9h | 22.190 |
| SRR8749029 | MeJA induced 9h | 27.513 |
| SRR8749030 | Uninduced | 8.117 |
| SRR8749031 | Uninduced | 6.002 |
| SRR8749032 | Uninduced | 7.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.281 |
| SRR8400027 | Control - Root | 28.973 |