Gene detail information of Glyur000553s00020388 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006596929.1 | 2.25E-31 | PREDICTED: uncharacterized protein LOC102662696 [Glycine max] |
| trEMBL | tr|K7K1X5|K7K1X5_SOYBN | 1.00E-31 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G06250.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00553 | 16584 | 17331 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.196 |
| SRR1783600 | control | 2.094 |
| SRR1783602 | moderate drought stress | 2.222 |
| SRR1811619 | moderate drought stress | 1.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.034 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.609 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.036 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.713 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.470 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.033 |
| SRR2868004 | Drought Stress (root) | 0.294 |
| SRR2967015 | Control (root) | 0.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.574 |
| SRR9715740 | Leaf | 2.864 |
| SRR9715741 | Leaf | 2.819 |
| SRR9715739 | Root | 0.795 |
| SRR9715742 | Root | 1.919 |
| SRR9715743 | Root | 1.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.088 |
| SRR8749028 | MeJA induced 9h | 3.263 |
| SRR8749029 | MeJA induced 9h | 6.036 |
| SRR8749030 | Uninduced | 2.332 |
| SRR8749031 | Uninduced | 1.053 |
| SRR8749032 | Uninduced | 2.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.164 |
| SRR8400027 | Control - Root | 13.267 |