Gene detail information of Glyur000553s00020387 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33585.1 | 5.00E-38 | |
| NR | NP_001235308.1 | 1.21E-59 | uncharacterized protein LOC100527639 [Glycine max] |
| trEMBL | tr|C6T4Y6|C6T4Y6_SOYBN | 5.00E-60 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G01580.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00553 | 5024 | 8308 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.178 |
| SRR1783600 | control | 18.561 |
| SRR1783602 | moderate drought stress | 30.906 |
| SRR1811619 | moderate drought stress | 30.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.728 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.474 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 46.680 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 44.896 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.564 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.418 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.558 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.481 |
| SRR2868004 | Drought Stress (root) | 14.941 |
| SRR2967015 | Control (root) | 18.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.025 |
| SRR9715740 | Leaf | 11.129 |
| SRR9715741 | Leaf | 7.594 |
| SRR9715739 | Root | 7.168 |
| SRR9715742 | Root | 10.884 |
| SRR9715743 | Root | 9.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 40.117 |
| SRR8749028 | MeJA induced 9h | 29.181 |
| SRR8749029 | MeJA induced 9h | 42.668 |
| SRR8749030 | Uninduced | 30.121 |
| SRR8749031 | Uninduced | 21.111 |
| SRR8749032 | Uninduced | 36.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.431 |
| SRR8400027 | Control - Root | 14.154 |