Gene detail information of Glyur000552s00024354.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26010.1 | 3.00E-97 | Peroxidase superfamily protein |
| NR | XP_004493228.1 | 0 | PREDICTED: peroxidase 44-like [Cicer arietinum] |
| Swissprot | tr|Q93V93|PER44_ARATH | 2.00E-126 | Peroxidase 44 (Precursor) |
| trEMBL | tr|A2Q4B7|A2Q4B7_MEDTR | 0 | Peroxidase family protein {ECO:0000313|EMBL:AES80947.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00552 | 138243 | 139749 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000552s00024354.1 | PF00141.18 | peroxidase | 37 | 283 | 3.20E-72 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.077 |
| SRR1783600 | control | 0.075 |
| SRR1783602 | moderate drought stress | 0.079 |
| SRR1811619 | moderate drought stress | 0.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.115 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.112 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.095 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.044 |
| SRR2868004 | Drought Stress (root) | 0.051 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.067 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.086 |
| SRR8749030 | Uninduced | 0.159 |
| SRR8749031 | Uninduced | 0.143 |
| SRR8749032 | Uninduced | 0.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.067 |
| SRR8400027 | Control - Root | 0.083 |