Gene detail

Gene detail information of Glyur000552s00024340

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G46110.1	4.00E-175	Glucose-6-phosphate/phosphate translocator-related
NR	XP_003542721.1	0	PREDICTED: triose phosphate/phosphate translocator, chloroplastic [Glycine max]
Swissprot	tr\|P21727\|TPT_PEA	0	Triose phosphate/phosphate translocator, chloroplastic (Precursor)
trEMBL	tr\|I1KLP7\|I1KLP7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G32190.1}

Sequence

Transcript Sequence

>Glyur000552s00024340.1
CAAAAATGAGCCAGTCCGTGACATCAATTACAGTAACACCAAATAGCGGTAAACCCTCCATCACAGCTTCTTCACAAGGCAAAGGAGAAACAGAACGCGATAAGGCACTGATATGAAGAAAAAGGGGCTCACACACAATCACCCCCTCCCCACCAATCACCCATTCCACCTAAGACACAAATCTCCTCCAACAGATAAGGGGGCCCCACCCTCTTCCATCCAACCACACAATCCCCTCTCACCTCCACCATACCACTATGCTCCCTCACCATCTCTCCCCGTCCATTCTACAACCCATCTACTTTAAATCGCATCAACGGCAATTACGGCATCGAGNGCACCCAGCTCACGTGCTCTGCGACGCACAAGATCATACCCCACGCGCAACAACAAAAAACGGACGGTTAACGAGAACCATACGTACCAATACGAAACCGCAACAACAGCAGCAGTAGCAGTAGCAAGCAACATCATCCATATCACTCTCTACTTGCCCCCATCGCCCTTCCCAATTTGGAGTCCAATGGAGTCNCGAGTGCTGTCACGCGCTACCACCCTCTCCTCCCTCCCTCACCTCCGCAAACTGCCGCGGGATTCCGTCGCCAATGCTTACCTCCTCTCCGTGAAATCGATCGGGTCCGTCGCCGACGGCGGGAACCTCATCTGGGGAAGGCAGCTCCGTCCTGAGCTGTGCTCGCCGGCGCTGAAGAAAGATGCTGTCCTCCTTAAGCCATGCCTCGCCGCCGCCTCCTCGCCGGCTGAGGGAAGCGATTCCGCCGGGGAAGCGAAGGTGGCTCCGGCCGGGTTCTTCGACCGGTACCCGGCTCTTGTCACCGGGTTTTTCTTCTTCATGTGGTACTTCTTGAATGTGATCTTCAACATCATGAACAAGAAGATCTACAATTATTTCCCCTATCCTTACTTCGTGTCGGTTATCCATTTATTCGTGGGTGTGGTGTACTGTTTGGTGAGCTGGGCCGTGGGCCTTCCTAAGCGAGCTCCTATGGACTCCAACCTGCTGAAATTGCTGTTTCCTGTGGCTGTGTGCCATGCAGTAGGCCATGTGACCAGCAATGTCTCATTTGCAGCAGTTGCTGTTTCTTTCACACATACCATTAAAGCTCTGGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGACAATCAATCCCCATAACTTTATGGCTGTCACTGGCTCCCGTTGTTCTTGGTGTGTCAATGGCATCGTTGACTGAGCTCTCATTCAACTGGCTCGGCTTCATAAGTGCTATGATTTCAAACATTTCCTTTACATACCGGAGTATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATATCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCACCAGCCGTAATTCTGGAAGGGCCTACACTGTTGAAGCATGGCTTCAATGATGCAATTGCTAAAGTAGGTATGGTCAAGTTCGTATCAGATCTCTTCTGGGTTGGGTTGTTTTACCATCTCTACAACCAGATAGCCACCAACACACTGGAGAGAGTTGCTCCTCTCACTCATGCAGTTGGCAACGTGCTGAAACGTGTATTTGTGATTGGATTTTCAATTATAGTCTTTGGTAACAAGATTTCCACCCAAACTGGTATAGGAACAGCCATTGCAATTGCTGGAGTGGCACTCTACTCCTTCATCAAAGCCAAGATTGAGGAGGAGAAGCGACAAGCAAAAGCAGCATAAGAAGACAGAGGCGTCAACTTGGAGGATGTCTTGCACTGTAAATCCATCACAAATTTCCTTCAAAATAATTGACTGGTTTACTATCATTGTGATAGCGCGCATTTTATTTTTCCTTCTTTTTTATTATTGTGAAATCTTTTATGCTTTTTGTTCATTGAGAAAACAATGAATTGCCGAGTTGCAGTCTTCTTTTGTTGACTGAAAAAAATGATGTATCCATGG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00552	68867	73457	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006810 transport

cellular_component
GO:0016021 integral component of membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000552s00024340.1	PF03151.11	TPT	247	390	4.80E-35

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.523
SRR1783600	control	1.443
SRR1783602	moderate drought stress	1.739
SRR1811619	moderate drought stress	1.650

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.142
DRR006520	Root Summer glycyrrhizin high producing strain	2.073
DRR006521	Root Winter glycyrrhizin high producing strain	0.113
DRR006522	Root Winter glycyrrhizin high producing strain	0.110
DRR006523	Root Summer glycyrrhizin low producing strain	1.671
DRR006524	Root Summer glycyrrhizin low producing strain	1.638
DRR006525	Leaf Summer glycyrrhizin high producing strain	485.626
DRR006526	Leaf Summer glycyrrhizin high producing strain	483.549

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.798
SRR2868004	Drought Stress (root)	25.177
SRR2967015	Control (root)	8.831

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	387.159
SRR9715740	Leaf	390.212
SRR9715741	Leaf	367.074
SRR9715739	Root	13.003
SRR9715742	Root	5.640
SRR9715743	Root	6.063

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.921
SRR8749028	MeJA induced 9h	2.586
SRR8749029	MeJA induced 9h	1.531
SRR8749030	Uninduced	1.180
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	2.640

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.141
SRR8400027	Control - Root	16.401