Gene detail information of Glyur000552s00024338 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28400.1 | 2.00E-05 | |
| NR | XP_006583833.1 | 1.54E-101 | PREDICTED: protein E6-like isoform X2 [Glycine max] |
| Swissprot | tr|Q01197|E6_GOSHI | 8.00E-23 | Protein E6 |
| trEMBL | tr|I1KLP5|I1KLP5_SOYBN | 3.00E-97 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G32150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00552 | 47991 | 48929 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 273.871 |
| SRR1783600 | control | 274.643 |
| SRR1783602 | moderate drought stress | 201.537 |
| SRR1811619 | moderate drought stress | 199.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 351.021 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 347.945 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 118.099 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 122.307 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.734 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 52.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 444.059 |
| SRR2868004 | Drought Stress (root) | 263.018 |
| SRR2967015 | Control (root) | 229.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.946 |
| SRR9715740 | Leaf | 4.861 |
| SRR9715741 | Leaf | 7.431 |
| SRR9715739 | Root | 16.140 |
| SRR9715742 | Root | 43.642 |
| SRR9715743 | Root | 39.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1342.265 |
| SRR8749028 | MeJA induced 9h | 521.267 |
| SRR8749029 | MeJA induced 9h | 341.655 |
| SRR8749030 | Uninduced | 0.767 |
| SRR8749031 | Uninduced | 1.386 |
| SRR8749032 | Uninduced | 1.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 378.254 |
| SRR8400027 | Control - Root | 532.225 |