Gene detail information of Glyur000552s00024336 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003542723.1 | 6.58E-66 | PREDICTED: uncharacterized protein LOC100811852 [Glycine max] |
| trEMBL | tr|I1M071|I1M071_SOYBN | 2.00E-66 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G24400.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00552 | 36660 | 39536 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.781 |
| SRR1783600 | control | 0.808 |
| SRR1783602 | moderate drought stress | 0.447 |
| SRR1811619 | moderate drought stress | 0.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.384 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.397 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.876 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.529 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.674 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.697 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.855 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.297 |
| SRR2868004 | Drought Stress (root) | 4.019 |
| SRR2967015 | Control (root) | 3.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.261 |
| SRR9715740 | Leaf | 3.944 |
| SRR9715741 | Leaf | 2.163 |
| SRR9715739 | Root | 0.145 |
| SRR9715742 | Root | 1.541 |
| SRR9715743 | Root | 0.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.417 |
| SRR8749028 | MeJA induced 9h | 0.635 |
| SRR8749029 | MeJA induced 9h | 1.036 |
| SRR8749030 | Uninduced | 1.101 |
| SRR8749031 | Uninduced | 1.759 |
| SRR8749032 | Uninduced | 2.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.813 |
| SRR8400027 | Control - Root | 1.801 |