Gene detail

Gene detail information of Glyur000551s00023180.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G78690.1	6.00E-95	Phospholipid/glycerol acyltransferase family protein
NR	XP_003629034.1	0	Phospholipid/glycerol acyltransferase family protein [Medicago truncatula]
Swissprot	tr\|Q9ZV87\|NAPES_ARATH	1.00E-126	N-acylphosphatidylethanolamine synthase
trEMBL	tr\|G7L7V8\|G7L7V8_MEDTR	0	Phospholipid/glycerol acyltransferase family protein {ECO:0000313\|EMBL:AET03510.1}

Sequence

Transcript Sequence

>Glyur000551s00023180.1
TGAAGCNGCCATTTGCTGAGTGTCGGTGGTGGCGGGGAAAATGTCGCGGAGGACGATGGAGTGGGCGGCGAGGCCCAACCACCTGGGAGGCATACCCAGAAAGCTGGTCATAGCGGCGGTTGGCGCCTTCGCCAAAACGGTGTCGTCTCTACTCAACACCACCTCCGTTCACAACGCCGACACCCTCCTCCGCCTCCTCCGCTCCCGTCCCCCACGCGTCCCCCTCATCACCGCTAGCAATCACATGTCCACTTTGGATGATCCGGTTATGTGGGGATTCAAGGGTTTCCCCATCTTTGATGCTAAGCTAGCTCGATGGGTACTCGCTGCCGAAGATATATGTTTCAGAAATGCGCTTTATTCCTACATTTTTCGAGTTGGGAAATGCATACCTATTACAAGAGGTGGTGGGATTTATCAAGAGCACATGAATGAAGCTCTTGATCGCTTAAATGATGGAGAATGGGTATCTATATCTGATATATTATTTATGAATTTTCTATGGCAGCTGCATACTTTTCCAGAAGGAAAAGTGCGTCAAGAAGATGCGCCTATAAGGCNATTGAAATGGGGAACTGCTAGTCTAATTGTCCGTGCACCTATAACTCCAATTGTATTGCCAATTGTTCATCATGGTTTTCACAAGGTGATGCCAGAGAAATTCATGTTTGGTAGACGGCCTCCTTTACCACTATGCAATAAGAAAATTGATATAATTATTGGTGATCCAATTGAATTTGACATTCCAGCAATGAGTCAAAGGGCTATTGCCCAGTCTCGTAATGAGTCATTCCCTACTATTGGATGGCCCAGAACTTCNGATGGTTTGGATGAGGCAGCACAGAGATGTCTCTACACCACAATTTCAGAGCAAATCCGTGATGCCATGGAGAGATTAAGGTGCTTTGGTAAAAGTTTTCTGAAGTCATAGGTCCATTCAATCCTACATATGCCTTTTTTTTTTGGTCAAACTANATATGCCTTTTTAGATGTCTCTTATTTGTTCATTGTATCATTCTTTGTTATTGTAGTTGATGGTTGAATGAGAACTCTTTACTTCGGGTCTTGATGTCAAGTGCCAATAGGATATATTCTCAGTTTTGTAGGGGGGATGGGCTAACCCTTCATGTACAGCCCAAAATAGATGGGCTAATATTTCAAAAACCAAATTTTCAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00551	92571	97196	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K13511	TAZ	EC:2.3.1.-	Glycerophospholipid metabolism	map00564

Gene Ontology

biological_process

GO:0006644 phospholipid metabolic process

GO:0008152 metabolic process

molecular_function
GO:0016746 transferase activity, transferring acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000551s00023180.1	PF01553.16	Acyltransferase	57	197	5.20E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.504
SRR1783600	control	16.641
SRR1783602	moderate drought stress	36.537
SRR1811619	moderate drought stress	36.536

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	14.286
DRR006520	Root Summer glycyrrhizin high producing strain	14.222
DRR006521	Root Winter glycyrrhizin high producing strain	23.634
DRR006522	Root Winter glycyrrhizin high producing strain	23.575
DRR006523	Root Summer glycyrrhizin low producing strain	10.696
DRR006524	Root Summer glycyrrhizin low producing strain	11.004
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.488
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.701

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.673
SRR2868004	Drought Stress (root)	13.377
SRR2967015	Control (root)	15.887

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.884
SRR9715740	Leaf	8.294
SRR9715741	Leaf	9.147
SRR9715739	Root	8.066
SRR9715742	Root	8.723
SRR9715743	Root	10.850

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.615
SRR8749028	MeJA induced 9h	10.645
SRR8749029	MeJA induced 9h	5.761
SRR8749030	Uninduced	6.951
SRR8749031	Uninduced	3.365
SRR8749032	Uninduced	5.855

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.325
SRR8400027	Control - Root	19.139