Gene detail

Gene detail information of Glyur000551s00023178

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G10520.1	2.00E-131	Subtilase family protein
NR	XP_003534221.1	0	PREDICTED: subtilisin-like protease-like [Glycine max]
COG	YP_004097803.1	2.00E-94	peptidase S8 and S53 subtilisin kexin sedolisin [Intrasporangium calvum DSM 43043]
Swissprot	tr\|Q9ZSP5\|AIR3_ARATH	1.00E-164	Subtilisin-like protease SBT5.3 (Precursor)
trEMBL	tr\|I1L4M7\|I1L4M7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G32760.1}

Sequence

Transcript Sequence

>Glyur000551s00023178.1
TACATTGCTTTCATCAGTCTCCGGAATATGAGGGCCATATTTGACATTTGTGTTGTGTAGACACCCCAAATGGATGCGTTGTGATTGCTTGCCTTTGCTACAAAAAAGCACTAGTCTCTTTCTCTTTCTGTCTCTCACACTCTCTCTCATAGTCATCACTAATTCAACATTTAACAACTAGTGCAGCTTCAACACCCTTTGGCTCATTTTTTTCTGCCACTACTACTACTACTCCATGTTTTCTCATTGCATCCATATCTTTTTGTTGTTATATAAGAACCTCGTTTGACACCAACCAATATGGCACCTCAACTATGATTCTCCTCCCCTTTCTCTTTTTTCCATCTGGGCNTTTTGTTTTCTGATTTATTTTTTTCTTTCTCAAAATTTTGAATTTGTTTTCATCCTTCTTCTTATATAATCGTTAGNACTATATCACTATATCCTACTAGGCTGCCTTTAGTCACCAGAAAAGGTTGAGACTTTAACAACAAAAATGTCTTCTTCTAGTTATGCTATGATGAGCAGTACCTTGTTTTATCTGTTTCTTCTTGGTGTGCTTGTTGCAAAAGTTAGCTTTTGCTTTTCTACTAAGGTTTATGTTGTGTACATGGGAAGCAGCAAAACTGGGGAACACCCAGATGATATTTTGAAGGAAAATCATCAGATACTTGCTCATGTCCACAGTGGAAGCATTGAGCAAGCACTAGCTTCTCATGTTTATAGCTACAGACATGGTTTCAGAGGCTTTGCAGCTAAGCTCACTGATGAACAGGCTTCCCAAATTTCTAAAATGCCAGGAGTGGTTTCTGTTTTTCCCAATTCTAAAAGAAAGCTGCACACAACTCATTCATGGGATTTCATGGGACTTTTGGATGACCAAACCATGGAGACTCTTGGCTACTCCATCAAGAACCAAGCGAATATCATCATNGGTTTCATTGATACTGGAGTTTGGCCTGAATCCCCAAGCTTCAGTGACACCGACATGCCTGAAGTGCCACCTGGGTGGAAGGGTCAATGTCAAGCAGGGGAAGCATTCAATGCCTCAACTTGCAACAGGAAAGTGATAGGAGCAAGATACTACATGAATGGATATGAAGCAGAAGAAGGGTCAGAATCAGATGCAGCAAAAGTCACATTCAGATCAGCTAGGGATAGCACAGGTCATGGNAGCCATACAGCATCTATAGCAACAGGGAGGTATGTGGCAAACATGAACTACATGGGTCTAGCAGGTGGAGGAGCAAGAGGGGGTGCACCTATGGCAAGGGTAGCTGTGTACAAGACATGTTGGGACTCAGGTTGCTATGATGTGGACTTGTTAGCTGCATTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTTTCTCTTGGTGCTCAGTCACCACAGGGTGACTATTTTAGTGATGCCATATCTGTGGGGTCATTCCATGCTGCTAGTCGTGGGGTGTTGGTTGTTGCATCAGCTGGAAATGAAGGGAGTCCTGGCTCTGCTACTAACCTTGCTCCATGGATCCTCACTGGTGATAGTCTCAGTCTCTTTGAAATGAATGCCTCCTCAAGGATAATTTCTGCTTCNGAAGCATTTGCAGGATACTTCACTCCTTATCAATCCAGCTACTGTTTACAGAGTTCATTGAATAAAACCAAGACCAAAGGGAAGGTTCTGGTGTGTAGACATGTGGGGAGTTCAACACAGTCAAAGGTGGAAAAGAGCAAGGTAGTAAAAGAGGCAGGTGGGGTTGGCATGATACTTATTGATGAGACAGATCAAGATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTCCTAGTTCAAGGATACTCAGAGCAAAGACAGTAATAGGGGCTCAGCCTGCACCACGTGTAGCAGCATTTTCTTCTAAAGGCCCCAATGCTTTAAATCCAGAAATTTTAAAGCCTGATGTCACAGCCCCAGGACTAAATATCCTTGCAGCATGGTCACCAGNAGCTGGCAACATGTTCAACATTCTCTCAGGAACTTCCATGGCTTGTCCTCATGTAACTGGAATTGCAACCTTAGTCAAAGCTGTNCATCCTTCATGGTCCCCATCTGCCATCAAATCTGCCATCATGACAACTGCTACAATTCTAGATAAGCACCACAGACCAATCAGTGTAGATCCTGAACAAAGAAGGGCTAATGCNTTTGATTATGGATCAGGGTTTATGAACCCTGCTAGAGTTCTTGAGCCTGGTCTCATCTATGACTCCGAGCCGGCGGATTTCGTCGCGTTCCTATGCTCACTNGGCTATGATCAGAGGTCACTCCATCTTGTTACTAGAGCCAACAGCACATGTGATGATGTTAGGGCATCATTCACCACTGCATCTGACCTCAACTATCCATCCATTGCAGTTCCAAATCTCAAAGACAACTTCTCAGTTACCCGGGTTGTGACTAATGTTGGAAAAGCACCAATTATATACAAGGCTCTTGTGTCTTCTCCCCCTGGTGTTAATGTCACTGTTGTGCCAAACAGGTTAGGATTCACAAGAATTGGGCAGAAACTCAAGTTCACTGTGAATTTCAAAGTAAATGCTGCTCCTCCTCCTTCAAAAGGGTACACATTTGGGTTCTTGTCATGGACAAATAGGAGATCACAAGTCACTAGTCCTTTGGTTGTAAAGGTTGCACCTGGAAACCATGGGTTGGTCAGATAACAATGCCTGTTTGTAAATATCTTATATTAAGAGCTTTGATGAGAACCTTATAGTCACTAGAACAACAAATCATTCATACTGAAAATCCTGATGCAAACTAGATGATCAATTCATGGCCAAAATTATATTAGGGGTTAATTATGTATTTATTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00551	67681	73723	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000551s00023178.1	PF05922.11	Inhibitor_I9	34	115	3.30E-16
Glyur000551s00023178.1	PF00082.17	Peptidase_S8	147	575	2.30E-37
Glyur000551s00023178.1	PF02225.17	PA	369	439	8.30E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	42.256
SRR1783600	control	42.575
SRR1783602	moderate drought stress	50.402
SRR1811619	moderate drought stress	50.250

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	76.086
DRR006520	Root Summer glycyrrhizin high producing strain	74.910
DRR006521	Root Winter glycyrrhizin high producing strain	4.230
DRR006522	Root Winter glycyrrhizin high producing strain	4.184
DRR006523	Root Summer glycyrrhizin low producing strain	40.978
DRR006524	Root Summer glycyrrhizin low producing strain	41.109
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.410
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.084

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	45.271
SRR2868004	Drought Stress (root)	54.358
SRR2967015	Control (root)	52.743

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.027
SRR9715740	Leaf	7.523
SRR9715741	Leaf	7.604
SRR9715739	Root	4.583
SRR9715742	Root	14.720
SRR9715743	Root	12.355

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	21.128
SRR8749028	MeJA induced 9h	38.180
SRR8749029	MeJA induced 9h	16.213
SRR8749030	Uninduced	1.993
SRR8749031	Uninduced	0.308
SRR8749032	Uninduced	1.385

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	36.234
SRR8400027	Control - Root	35.777