Gene detail information of Glyur000549s00029253 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29960.1 | 3.00E-15 | |
| NR | XP_004487988.1 | 3.07E-37 | PREDICTED: uncharacterized protein LOC101508704 isoform X3 [Cicer arietinum] |
| trEMBL | tr|G7IG78|G7IG78_MEDTR | 5.00E-36 | Transmembrane protein, putative {ECO:0000313|EMBL:AES65318.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00549 | 10860 | 11944 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 62.959 |
| SRR1783600 | control | 60.404 |
| SRR1783602 | moderate drought stress | 52.774 |
| SRR1811619 | moderate drought stress | 52.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.061 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.745 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.936 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.382 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.957 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.631 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.241 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.935 |
| SRR2868004 | Drought Stress (root) | 23.373 |
| SRR2967015 | Control (root) | 22.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.261 |
| SRR9715740 | Leaf | 11.092 |
| SRR9715741 | Leaf | 19.200 |
| SRR9715739 | Root | 27.948 |
| SRR9715742 | Root | 33.462 |
| SRR9715743 | Root | 31.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.154 |
| SRR8749028 | MeJA induced 9h | 10.078 |
| SRR8749029 | MeJA induced 9h | 3.652 |
| SRR8749030 | Uninduced | 1.444 |
| SRR8749031 | Uninduced | 2.193 |
| SRR8749032 | Uninduced | 3.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.146 |
| SRR8400027 | Control - Root | 40.187 |