Gene detail information of Glyur000548s00021020 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70505.1 | 3.00E-64 | |
| NR | ACJ84809.1 | 1.78E-136 | unknown [Medicago truncatula] |
| trEMBL | tr|B7FJ80|B7FJ80_MEDTR | 7.00E-137 | Putative uncharacterized protein {ECO:0000313|EMBL:ACJ84809.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00548 | 16335 | 22460 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.345 |
| SRR1783600 | control | 11.785 |
| SRR1783602 | moderate drought stress | 14.388 |
| SRR1811619 | moderate drought stress | 14.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.714 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.116 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.741 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.285 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.554 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.490 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.506 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.019 |
| SRR2868004 | Drought Stress (root) | 47.370 |
| SRR2967015 | Control (root) | 41.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.851 |
| SRR9715740 | Leaf | 23.161 |
| SRR9715741 | Leaf | 39.404 |
| SRR9715739 | Root | 16.663 |
| SRR9715742 | Root | 17.614 |
| SRR9715743 | Root | 16.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.250 |
| SRR8749028 | MeJA induced 9h | 49.507 |
| SRR8749029 | MeJA induced 9h | 62.859 |
| SRR8749030 | Uninduced | 55.960 |
| SRR8749031 | Uninduced | 88.748 |
| SRR8749032 | Uninduced | 49.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.292 |
| SRR8400027 | Control - Root | 20.807 |