Gene detail information of Glyur000547s00026290 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G24150.1 | 4.00E-17 | heptahelical protein 3 |
| NR | CAN61543.1 | 2.24E-22 | hypothetical protein VITISV_008489 [Vitis vinifera] |
| Swissprot | tr|Q9ZUH8|HHP3_ARATH | 3.00E-20 | Heptahelical transmembrane protein 3 |
| trEMBL | tr|M0S595|M0S595_MUSAM | 2.00E-23 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P05040_001} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00547 | 144137 | 144724 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.992 |
| SRR1783600 | control | 18.866 |
| SRR1783602 | moderate drought stress | 27.161 |
| SRR1811619 | moderate drought stress | 25.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 51.202 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 49.680 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 50.643 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.406 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 62.814 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 55.488 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.189 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 86.612 |
| SRR2868004 | Drought Stress (root) | 63.122 |
| SRR2967015 | Control (root) | 60.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.425 |
| SRR9715740 | Leaf | 26.795 |
| SRR9715741 | Leaf | 29.924 |
| SRR9715739 | Root | 53.237 |
| SRR9715742 | Root | 51.130 |
| SRR9715743 | Root | 50.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.314 |
| SRR8749028 | MeJA induced 9h | 14.278 |
| SRR8749029 | MeJA induced 9h | 8.204 |
| SRR8749030 | Uninduced | 8.600 |
| SRR8749031 | Uninduced | 3.961 |
| SRR8749032 | Uninduced | 7.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 117.313 |
| SRR8400027 | Control - Root | 99.250 |