Gene detail information of Glyur000546s00034979 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G36380.1 | 6.00E-15 | |
| NR | AFK38660.1 | 9.82E-43 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SEG8|I3SEG8_LOTJA | 4.00E-43 | Uncharacterized protein {ECO:0000313|EMBL:AFK38660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00546 | 105811 | 109335 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.971 |
| SRR1783600 | control | 30.102 |
| SRR1783602 | moderate drought stress | 38.814 |
| SRR1811619 | moderate drought stress | 36.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.402 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.328 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 46.178 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.497 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.072 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.198 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.293 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.881 |
| SRR2868004 | Drought Stress (root) | 35.530 |
| SRR2967015 | Control (root) | 39.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.689 |
| SRR9715740 | Leaf | 31.383 |
| SRR9715741 | Leaf | 37.077 |
| SRR9715739 | Root | 7.124 |
| SRR9715742 | Root | 11.306 |
| SRR9715743 | Root | 9.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.026 |
| SRR8749028 | MeJA induced 9h | 45.236 |
| SRR8749029 | MeJA induced 9h | 80.135 |
| SRR8749030 | Uninduced | 48.860 |
| SRR8749031 | Uninduced | 74.894 |
| SRR8749032 | Uninduced | 94.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.847 |
| SRR8400027 | Control - Root | 28.171 |