Gene detail information of Glyur000545s00023423 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17740.1 | 1.00E-10 | |
| NR | XP_003620103.1 | 2.03E-56 | Disease resistance-like protein GS3-4 [Medicago truncatula] |
| Swissprot | tr|Q9SZ67|WRK19_ARATH | 6.00E-09 | Probable WRKY transcription factor 19 |
| trEMBL | tr|G7KJS7|G7KJS7_MEDTR | 8.00E-57 | Disease resistance protein (TIR-NBS-LRR class), putative {ECO:0000313|EMBL:AES76321.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00545 | 110859 | 114623 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.549 |
| SRR1783600 | control | 1.583 |
| SRR1783602 | moderate drought stress | 10.493 |
| SRR1811619 | moderate drought stress | 9.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.921 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.578 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.674 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.186 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.248 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.223 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.602 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.607 |
| SRR2868004 | Drought Stress (root) | 12.489 |
| SRR2967015 | Control (root) | 14.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.176 |
| SRR9715740 | Leaf | 2.775 |
| SRR9715741 | Leaf | 8.161 |
| SRR9715739 | Root | 0.632 |
| SRR9715742 | Root | 8.563 |
| SRR9715743 | Root | 8.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.885 |
| SRR8400027 | Control - Root | 7.082 |