Gene detail information of Glyur000545s00023421 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G59960.1 | 6.00E-14 | NAD(P)-linked oxidoreductase superfamily protein |
| NR | XP_006587450.1 | 9.54E-25 | PREDICTED: methylecgonone reductase-like [Glycine max] |
| Swissprot | tr|E7C196|MER_ERYCB | 3.00E-18 | Methylecgonone reductase |
| trEMBL | tr|K7LEE4|K7LEE4_SOYBN | 4.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G29991.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00545 | 93691 | 96185 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.051 |
| SRR1783600 | control | 0.051 |
| SRR1783602 | moderate drought stress | 2.781 |
| SRR1811619 | moderate drought stress | 2.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.422 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.621 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.578 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.758 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.782 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.161 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.674 |
| SRR2868004 | Drought Stress (root) | 3.847 |
| SRR2967015 | Control (root) | 1.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.315 |
| SRR9715740 | Leaf | 9.124 |
| SRR9715741 | Leaf | 14.261 |
| SRR9715739 | Root | 2.024 |
| SRR9715742 | Root | 6.569 |
| SRR9715743 | Root | 6.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.523 |
| SRR8749028 | MeJA induced 9h | 0.739 |
| SRR8749029 | MeJA induced 9h | 0.080 |
| SRR8749030 | Uninduced | 0.840 |
| SRR8749031 | Uninduced | 0.100 |
| SRR8749032 | Uninduced | 0.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.272 |
| SRR8400027 | Control - Root | 2.771 |