Gene detail

Gene detail information of Glyur000544s00017430

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G54560.1	Myosin family protein with Dil domain
NR	XP_006606471.1	PREDICTED: myosin-11-like [Glycine max]
Swissprot	tr\|F4HWY6\|MYO11_ARATH	Myosin-11
trEMBL	tr\|I1NIS2\|I1NIS2_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G36970.1}

Sequence

Transcript Sequence

>Glyur000544s00017430.1
ATGATGATTCCTCATCTCTATCTGCAGGGGACTCCGGTGAATATTATTGTGGGTTCTCATGTCTGGATCGAAGACCCAGAGGTAGCTTGGATTGATGGACAGGTATCAAAAATCAATGGAAAGGATGCTGAAATTGAAACGACCAATGGAAAAAAGGTTGTTGCAAATTTATCAAATATACTCCCCAAGGATATGGAAGCTCCTCCTGCTGGAGTGGATGATATGACTAAGCTGTCCTATTTGCATGAGCCTGGAGTCCTNCAGAACTTAAAAACTAGATATGAACTGAATGAAATATATACTTATACCGGAAATATTCTGATTGCAATAAACCCATTTCAAAGGCTACCTCATATTTATGGTGCGCACATGATGCAACAATACAAGGGAGCGCCATTTGGAGAATTAAGTCCTCATGTATTTGCAGTAGCTGATGTTGCATATAGGGCAATGGTTAATGAAGGAAGAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCAATACCTTGCCTTCCTAGGTGGTAGAGCTGCTACTGAAGGAAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGCGGAAGAATCTCGGGAGCAGCCATCCGAACATACCTTCTCGAGAGATCTCGGGTTTGTCAGGTTAATGATCCTGAACGGAACTACCACTGCTTTTATCTTCTCTGTGCTGCACCACATGAGGAAATTGAGAAATACAAATTAGAAAATCCTAGATCGTTTCACTATCTTAACCAGTCAAAATGCTATGAACTGGCTGATGTAAGTGATGCCCGTGAGTATCTTGCCACTCGTAGAGCTATGGATATTGTTGGAATAAGTAAAAATGATCAGGAAGCCATTTTCAGAGTTGTTGCTGCAATTCTTCATCTTGGTAATATTGATTTTTCCAAAGGAAAGGAAATTGACTCATCAATTCCAAAAGATGACAAATCCAAATTCCACCTTAAAACAGCTGCTGAGCTTTTGATGTGTGATGCTGACGGCTTGGAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAACGGAGCCTTGACCCGCAAAGTGCAGCAATCAGTAGAGATGGATTGGCAAAAACAATTTATTCTCGGCTATTTGACTGGTTGGTGGACAAGATTAATAATTCAATCGGACAAGACCCCAATTCTAAATCTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTGTCATGCTCTGCACACGTGTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATCGATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCCGGAGGAATTGTTGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACATTTGCAAACAAGCTTTATCAAACATTTAAGAATAACAAGCGCTTTATTAAGCCAAAATTGTCTCGAACGGATTTTACCATTGCTCATTATGCTGGAGAGGTGNCATACCAGTCTGACCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGAGTGCTTCCAAATGTACTTTCGTATCTGGCCTTTTTCCACCACTTCCAGAAGAGACATCAAAATCAAAATCTTCCAAATTTTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAGCAACTAATGGAAACATTAAATTCCACAGAACCCCATTACATTAGATGCGTGAAACCAAACAACCTCCTCAAGCCTGCGATTTTTGAGAATGTCAACATTATGCAGCAACTTCGTTGTGGTGGTGTGTTGGAGGCTATTAGAATCAGTTGTGCTGGCTACCCTACTCGTCGCCTTTTCTTTGAATTTGTAAACAGATTTGGCATCCTTGCCCCAGAGGCCATGGCAGCAAACTGTGATGATAAAACTGGTTGCCAGAAGATTCTGGAAAAGATGGGGCTTAAAGGATATCAGATCGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTAGACGCTCGGAGAGCTCAAGTACTTGGCAATGCAGCAAAAGTTATCCAACGGCGCGTACGAACCCATCAAGCTCGTAAACATTATCTTGCATTACGAAAGAAGGCCATATATGTGCAGTCTCGGTGGAGAGGAAGACTTGCATGCAAACTCTATGAGAAAATTAGAAGGGAGGCTGCTGCTAGGAAAATTCAAAAGAACATACGCAGATATGAAGCTAGGAAGGCTTATAAAGAACTTCATGTGTCAGTACTTATATTGCAAACAGCTTTAAGGGCCATTGCTGCTCGCAAGGAGTTCAGATTTAGGAAACAGACTAAAGCTTCCATCATTATTCAGGCTCAGTGGCGGTGCCACAAAGCTGCCTTACATTATAAGAGGCTCAAAAAAGGTTCAATAGTTACACAATGCAGATGGAGGGGGCGTTTAGCCAGGAGAGAACTTCGGAAACTGAAAATGGCACGTTTCCATGCTGCAAGAGAAACTGGCGCACTTCAGGAAGCAAAGGATAAGCTCGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAGGTTTAAGGACCAATCTAGAAGAATCCAAAGCTCAGGAGATAGCAAAACTGCAGAACTCATTGCAGGAGATGCAGTGCAAATTTGATGAAACTAATGCTCTGCTCCTCAAGGAGCGAGAGAATGCAAAGAAAGCTATTGAAGAAACACCTCCTGTCATTAAAGAAACGAAGGTTATCGTTGAAGATACACAGAAGATTGAGACACTGAGAATGGAAGTTGAGAGTCTAAAGACTTCACTCGAGTCAGAGAAACAGAAAGCCAATGACTTTGAAACGAAATATAATGAAGCTCAAGTTTGTAGTGAAGAAAGAGGTAAAAAATTAGAAGACACGGAGAAGAAGGTTCGTCATCTCCAAGAATCATTGACCAGGCTAGAAGAGAAGATAACTAATTTAGAATCAGAGAATCAGGTTCTGCGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACGCTCCAGATCAATTGTCCAGAGAGCTGCTGAAAGTGGTCATATTGTAGTGGAGGCAAAGACACCTTTGGAACTGCATAGCCCATCAATGAACCAGAGAGAATCCTCTGAAGTGGAGGATAAACCACAGAAGTCACTAAATNAGAAACAACAGGAGAATCAAGAGTTACTCATTAGATGTATTGCACAACATCTAGGCTTTGCTGGGAACAGACCAATTGCTGCCTGTATCATATATAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGTACTAGTGTTTTTGATCGTATCATCCAAACTATTGGCCACGCAATTGAGACGACTCAGGATAACAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCAACACTTCTCTTGTTACTCCAGAGCACACTCAAAGCAAGTGGTGCTGCTGGAATGGCTCCACAACGCCACCGTCGTTCTTCATCAGCAACCCTGTTTGGGAGGATGACTCAAAGTTTCCGTGGAACTCCAACTGGAGTCAATCTTTCCCTAATCAATGGTAGCTCAAGCAGAGGAGTAGATACATTAAGACAAGTTGAAGCCAAGTACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGTGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCAAGAACATCCAGAGCAAGCTTGGTTAAGGGGTCATCACGCTCTGTTGCAAACACTGAAGGCCAGCGCGCTTTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTAGGAAACTTTTTAAATACTTTGAGAGCAAATCATGTTCCCCCATTTTTGGTNCGTAAGGTGTTCACACAAATTTTTTCTTTCATCAATGTACAATTGTTCAATAGTCTTCTTTTAAGACGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTCAAAGCTGGTTTGGCTGAATTAGAACATTGGTGTTATAAGGCAACAGATGAGTATGCAGGTTCAGCCTGGGATGAGCTCAAACATATTAGACAAGCCATTGGATTTCTGGTCATTCATCAGAAACCAAAGAAAACACTGGATGAAATAAGCCATGACCTGTGCCCAGTCCTTAGTATTCAGCAGCTATATCGGATTAGCACCATGTACTGGGATGACAAATATGGAACGCATAGTGTGTCCTCTGATGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCTTGTTGGATGATGATTCAAGTTCTTCTCGAATGTCAACTGCTTGGCATCAGTTCACAGTATTTATTGCTTTAATATCTAATGAATTTGACCCTGGACATGTTGCCTGTGCAACAGCCGGCATTCCGTTTTCAGTTGATGACATATCGAAGTCAATGGAACAAATAGATATCTCAGATATAGAGCCCCCACCACTGATTCGCGAAAACTCTGGCTTTAGCTTTTTGTTGCCCCGCCCAGATTGACTGCTTTTGTTGTAGAATTGACCGACTGGTATTCTTATACACCTCCGTGGAGATATCAAGTCACATTCGGTTAGATATTATCATGGAATGCTGAATTGTTGACTTTGGTTGTGTCAGAAACAAGCCATTGAATTTCAACGCCCCAAATTTACTTCTTAGAAGTTTCAGAAATGGATGACACAAGCAGATCACCCCCATTGTGCAAGTTGTTTATTGAGGCGGGAGTGAAAAGAATAATACTACAATAGCCTTTATCTTTGATTATTTCCTTCTCCATTTTATTTAAATCTTGTTACTTCTCGGCACAGAGCTTTGCTTAGAATAAGGAATGGAATTTTGTATCTAGAAGGATCGGAATTTCACCCCGATT

Protein Sequence

>Glyur000544s00017430.1
MMIPHLYLQGTPVNIIVGSHVWIEDPEVAWIDGQVSKINGKDAEIETTNGKKVVANLSNILPKDMEAPPAGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYGAHMMQQYKGAPFGELSPHVFAVADVAYRAMVNEGRSNSILVSGESGAGKTETTKMLMQYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPHEEIEKYKLENPRSFHYLNQSKCYELADVSDAREYLATRRAMDIVGISKNDQEAIFRVVAAILHLGNIDFSKGKEIDSSIPKDDKSKFHLKTAAELLMCDADGLEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINNSIGQDPNSKSLIGVLDIYGFESFKSNSLSCSAHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKNNKRFIKPKLSRTDFTIAHYAGEVXYQSDQFLDKNKDYVVPEHQDLLSASKCTFVSGLFPPLPEETSKSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRLFFEFVNRFGILAPEAMAANCDDKTGCQKILEKMGLKGYQIGKTKVFLRAGQMAELDARRAQVLGNAAKVIQRRVRTHQARKHYLALRKKAIYVQSRWRGRLACKLYEKIRREAAARKIQKNIRRYEARKAYKELHVSVLILQTALRAIAARKEFRFRKQTKASIIIQAQWRCHKAALHYKRLKKGSIVTQCRWRGRLARRELRKLKMARFHAARETGALQEAKDKLEKRVEELTWRLQLEKGLRTNLEESKAQEIAKLQNSLQEMQCKFDETNALLLKERENAKKAIEETPPVIKETKVIVEDTQKIETLRMEVESLKTSLESEKQKANDFETKYNEAQVCSEERGKKLEDTEKKVRHLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIVQRAAESGHIVVEAKTPLELHSPSMNQRESSEVEDKPQKSLNXKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETTQDNNDVLAYWLSNASTLLLLLQSTLKASGAAGMAPQRHRRSSSATLFGRMTQSFRGTPTGVNLSLINGSSSRGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEGQRALIAHWQGIVKSLGNFLNTLRANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSSDVISNMRVLMTEDSNNAVSNSFLLDDDSSSSRMSTAWHQFTVFIALISNEFDPGHVACATAGIPFSVDDISKSMEQIDISDIEPPPLIRENSGFSFLLPRPD

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00544	88176	101743	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016459 myosin complex

molecular_function

GO:0003774 motor activity

GO:0005515 protein binding

GO:0005524 ATP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000544s00017430.1	PF02736.14	Myosin_N	19	55	7.20E-08
Glyur000544s00017430.1	PF00063.16	Myosin_head	72	716	7.40E-222
Glyur000544s00017430.1	PF00612.22	IQ	733	751	0.0022
Glyur000544s00017430.1	PF00612.22	IQ	755	774	0.058
Glyur000544s00017430.1	PF00612.22	IQ	781	800	0.0033
Glyur000544s00017430.1	PF00612.22	IQ	828	848	0.0075
Glyur000544s00017430.1	PF00612.22	IQ	853	871	0.013
Glyur000544s00017430.1	PF01843.14	DIL	1350	1456	6.00E-36

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.434
SRR1783600	control	1.459
SRR1783602	moderate drought stress	2.003
SRR1811619	moderate drought stress	1.933

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.873
DRR006520	Root Summer glycyrrhizin high producing strain	0.896
DRR006521	Root Winter glycyrrhizin high producing strain	2.503
DRR006522	Root Winter glycyrrhizin high producing strain	2.491
DRR006523	Root Summer glycyrrhizin low producing strain	1.302
DRR006524	Root Summer glycyrrhizin low producing strain	1.322
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.047
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.036

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.064
SRR2868004	Drought Stress (root)	4.441
SRR2967015	Control (root)	3.981

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.907
SRR9715740	Leaf	3.304
SRR9715741	Leaf	1.822
SRR9715739	Root	0.146
SRR9715742	Root	1.108
SRR9715743	Root	0.944

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.851
SRR8749028	MeJA induced 9h	3.279
SRR8749029	MeJA induced 9h	1.823
SRR8749030	Uninduced	0.607
SRR8749031	Uninduced	0.401
SRR8749032	Uninduced	0.255

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.718
SRR8400027	Control - Root	5.547