Gene detail information of Glyur000541s00027317 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80130.1 | 1.00E-24 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| NR | XP_003545994.1 | 4.20E-82 | PREDICTED: uncharacterized protein LOC100801597 [Glycine max] |
| COG | YP_004509659.1 | 9.00E-09 | hypothetical protein PGTDC60_0936 [Porphyromonas gingivalis TDC60] |
| trEMBL | tr|I1MCF6|I1MCF6_SOYBN | 2.00E-82 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G01060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00541 | 30494 | 33578 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 465.986 |
| SRR1783600 | control | 470.072 |
| SRR1783602 | moderate drought stress | 597.137 |
| SRR1811619 | moderate drought stress | 595.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 373.015 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 371.203 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 432.080 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 420.928 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 191.087 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 193.083 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.336 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.888 |
| SRR2868004 | Drought Stress (root) | 33.575 |
| SRR2967015 | Control (root) | 39.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.788 |
| SRR9715740 | Leaf | 1.659 |
| SRR9715741 | Leaf | 1.483 |
| SRR9715739 | Root | 15.497 |
| SRR9715742 | Root | 72.517 |
| SRR9715743 | Root | 55.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 109.878 |
| SRR8749028 | MeJA induced 9h | 98.157 |
| SRR8749029 | MeJA induced 9h | 83.105 |
| SRR8749030 | Uninduced | 17.967 |
| SRR8749031 | Uninduced | 9.377 |
| SRR8749032 | Uninduced | 20.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 138.838 |
| SRR8400027 | Control - Root | 107.769 |