Gene detail

Gene detail information of Glyur000538s00027559

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G14460.1	7.00E-120	LRR and NB-ARC domains-containing disease resistance protein
NR	XP_004513271.1	0	PREDICTED: putative disease resistance protein At3g14460-like [Cicer arietinum]
COG	YP_007146276.1	4.00E-09	Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum stagnale PCC 7417]
Swissprot	tr\|Q9LRR5\|DRL21_ARATH	0	Putative disease resistance protein At3g14460
trEMBL	tr\|A0A061FTC8\|A0A061FTC8_THECC	0	LRR and NB-ARC domains-containing disease resistance protein, putative {ECO:0000313\|EMBL:EOY20017.1}

Sequence

Transcript Sequence

>Glyur000538s00027559.1
ATGGGGAGAGCCTTACTCTCTGCTTTCCTTCATGAACTATGGGACAACCTTCTCCTTCTCACTTCTGGAACCAAAACTTTCATGATGAAACCACCCAGATATCAGCGCAAACTCATGGCTAAATTGCTGATGCATGATGCTCTCGTGGATGACGCTGAACAGAAGCAGTTCACAGGAGGATTAGTCCAACCCCTAGTGGTGAAGGACTGGCTTGATGCGTTGCAATATGCTCTTTATCATTTGGAGGATCTTCTATGGCAGTGGCAGAATACCACCACCACCAACACCAAGTCCTTGCAGTTCTTCGGAGTCTTCTCAAAATCAAACAAGCCAGATGCGGACATGAAAGCTCAAATCCGTGACATCGCGGAGATCTTAGAAGATCTTGCAAAAAAGAAGGATGTCCTTGGCTTAATTGAGCGTGTTACATGGAGAGAATCCCTACATGGCCTGTCCTCATGTTCTGTTGTTTTGGATAACTATTTCTATGGCAACCATCCCAAAGATTATTTCTATGGAAGAGATGAGGAAGAGATGTCTGTGCTGGGAATCCTGTTATCAACTAGTGAGCATATCAAAGTGATTAACATAGAGGGCAAGGCCGGGGNGGGTAAGACTGCTTTTGCTGATGTTATCTACTTCAACCACAAGGTGAAGGAGTCTTTTGAACTCAGAGCTTGGGTCACTGTTCCCTACAAAACCAGCCTTAACGTCATGGCTAAGAAGATTCTTGAGACAGTCACTGAGGAGTTTGTTCCCAGCAATGATTTCCATGAGCTAACAAAAAGGTTGCAAGAGAGCTTTGCAAGTAAGAAATTTCTGCTGGTGTTGGACGATATCGCGATTGAGGATGCATCAGAGAACTGGAATATGCTTATTGCTTCCTTTGAAGCAGCAGCAGGAGGGAGTGCTATAATCTTAATGTCCAATCCTAATGATGATCCACTGCTTGTGCCACCTGCTAACCACAATCTGCACCTGGGTTTGCTATCAACAGAGAATTCCTGGTCAATTTTTTTGGTGCATGCTTTTGGGCAGATAGACCTTCACAAGCACCCGGAACTAGTAGCAGTTGGCAAGGCAATAGTCAACAAATTGGGAAACCTTCCCTTGGCTGCAAAAATGATTGGGAGCCTCTTGCAAGATAAGCTATATCTCAATGAGTGGGTTGAGATATTGAGGAGCAAATTACTGGATGAAGGTGATCTGAATCTCCCCATTCCTGCTTTTCTAGTGTTGTGTTACCTCGATCTCCCTGCGCAGCTTAAACGGTGTTTTACTTATTTGTCATTATTTCCAAAGGGTTATGAATTCAAGCAGAAAGATGTGATCCTCTTGTGGATGGCCCAAGGCTTTCTGCAAAACTCGAACTCTAAATCCAATGACAAAAGCATGGAAGACATTGGTGATGAGTACTTTGGCTATCTGATAATGAGGTCATTTTTGCAGCCTTTTGGTTCTGGTGTTAGCTTTACAATGCATAATCTGGTTCATGATTTGGCATCCTACGCGTTTGGAGAATCATATAAGCACCATTTGTCATATTCTAGAAGCACACAGGATTTTCCAGAATCTTTTTTTGATAAACATAGAAAATTATTAAGATCAATTTTGCCAATAAATTTGCCACTTGAGNGGGCACCTAGCCACTTCCGCCCTTTGGAGCTGGAGAAAATTATTTGGCAGTTGAATCCACAGGTCTTCCGGACCCTTTCTTTATCTCACTATGATATCACGAACTTGCCTGCTTCAATTGGAAGATTGAGTCATCTTTGTTACCTTGACCTTTCTTACACCGCGTTACAGGCACTGCCAGATTCCGTTTGTGATCTGCTTAATTTGCAAACGCTTATGTTAACAAACTGCAGTTCTCTCACTAGTTTTCCTCCAAGAATGTGCAATTTGATAAACTTGCATTGCCTTGATGTCAGAGATAGCGGTGTGCAAGAGATGCCTTTGAAAATGCACAAAATGACAGGTCTCCGGACATTGACAGACTTCATTATTTCGAATAAAGAGTCAAGGTTTATAGATTTAGCAGGGCTTTCCAATCTCAAAACATTGACCATTTCAAAGTTGGAAAATGTGGCCTACGCCNTGGATGCTTCAAATGTCAAACTGAAAGAGAAAAAGAACCTTGATGATCTTATGCTTCAATGGGGCAATGGTGAAGATGGCAATGGAAATGGAATGGAAGTGCTTGAGAATCTAGAACCACACAGAGGCTTAAAAAGACTAACAATTGAATACTATGGCGGTGCAAGATTCCCAAATTGGTTGGGGGATCCATCTTATTGGGCATTACAGTTAGTAGATCTCCGTCATTGTGGAAATTGCAATTCATTGCCAACACTTGGGCTGCTTCCAGTTCTTAAAGATCTCTTTATTGAGGGGTTCACGAAAGTAAGTTCCATAGGCCCTGAGTTTTATGGAGTGATGACTGCTTCACATAAGCCATTTCAATATTTAGAGACTTTGCAGTTTTGGGATATGTTGGAATGGAAAGAATGGAATCTATTAGAAGGTATTGAATTCCCCCATCTCATTGAGCTTTATATAATACGGTGTCCCAAGCTAGTGAGAAACTTACCCAAGCAACTTCCTTCTTTACAGAAGTTAGAGATTTCTGGATGCTATGACCTTGTGGCTCCACTTCCAAAAGTTTCAAATGGATGCGAAGTGTTTGTACATGATAGTAATGAAATTCTGATGAGAAGTTCTGTTAAAATCCACTCACAAACATCCTTTCGCCGCCAAGTCGTAATTTCTGAAGAAGTACAGGAAATCACCCCACAATCCTATTCTGGCTTTCCCAGTAANAAGTACACCATTGGCTCTTCTGTAAGCGAGATTGAAGAAATTGCTCATGAAGAAAGGATGGAATCTGAATTCACAAGAAATAGATTACCACCTAAACCTGTATCTTTGGGTACAACAAGGATCCCAAAACTACAGGAACTTTCCTCTGGCTTGGCCAGTCAACAAGTTCAAGCTGATACTCCTAGCATCAAACAGCAAAAAGACCCACAATCTTCAGTGGCTAAAGCTGACATTCCAGTCACTACACAAGCTTCTTTCCTNCCTCTTACTGATATGCCTAACACAACAACCAAGGTAGAAACTTCACCCACACAAGATTTTGATGATCAACGATCATCCTTTGAAATCTTGAAGGTTTCATCCATATCACAATTGATGTCATTGCCGCCCAAGCTGCACAGCCTAAAAATTGAAAGATGTGAATCATTAGAGGTCCTTCCAGGTGATTTACTAGGCGGATTACCAGTTCTTAAAGAATTGTATCTTATCAGTTGTTCTTCTCTTAGATCCTTCCCTTGCCCTGCTTCCTTGACAACACTTTACATACGTAACTGTAGAAGATTGGAATTCCCCCCATCTTTAGAATCAAGAGAGAAGCTTTCCTTTCTCCACCATTTGTTCATTGGGAATAGTTGTGATTCCCTCACTACCTTGACATTAAATTTGTTCCCTGAACTCAAAATTCTTTGTATATGGGGTTGTACCAATCTTCTATCATTTTATATTACATGGGAATTTGGGGGTGATATCGAATCACTTGAGTCTTTAGAAATCAGAGACTGCCCAGAATTGAGGTTTTTCCCAGATGAAGAACTACACACACCAAATCTAGCATCCATGTTCATTTCCAATTGCAAGAATCTTAACAGATTGCCCAATTCTATGAACTCTGTCAAGTCATTATTTTTAAACAGATGTCCACATATTGAATCTTTCCCATTTGGGGGCTTGCCTTCAAGTTTAACTCTACTTTCCATCGCTTATTGCGACAAACTCACACCACAAAAGGATTGGGGATTGGAAAATATCGAGTCTCTCACTCATTTTGAAATTGAAGGTGGATGCATGGGCATGGAATCATTTCCAGAGGAGAAGCTGCTTCCCAGAAATATCATCTCTCTGCGCATCAGCACACTAAAGAGTCTCAGGAAGCTGGACTACAAGGGTTTTCAACACCTGAATGCTCTTCAGACACTTGAAATTAGTTGCTGTGACATGCTACGGTCCTTGCCTGAACAAGGTCTTCCTTCCTCCTTAAACCATCTCTGTATCCTGGAATGCTCAGTGTTGACTCCGAGGCTTAAACCCAAAACAGGAAAGGATTGGCACAAGGTGGCTCGTATCCCACACATACAAATTGATGACCAAGTACTCTCTTGA

Protein Sequence

>Glyur000538s00027559.1
MGRALLSAFLHELWDNLLLLTSGTKTFMMKPPRYQRKLMAKLLMHDALVDDAEQKQFTGGLVQPLVVKDWLDALQYALYHLEDLLWQWQNTTTTNTKSLQFFGVFSKSNKPDADMKAQIRDIAEILEDLAKKKDVLGLIERVTWRESLHGLSSCSVVLDNYFYGNHPKDYFYGRDEEEMSVLGILLSTSEHIKVINIEGKAGXGKTAFADVIYFNHKVKESFELRAWVTVPYKTSLNVMAKKILETVTEEFVPSNDFHELTKRLQESFASKKFLLVLDDIAIEDASENWNMLIASFEAAAGGSAIILMSNPNDDPLLVPPANHNLHLGLLSTENSWSIFLVHAFGQIDLHKHPELVAVGKAIVNKLGNLPLAAKMIGSLLQDKLYLNEWVEILRSKLLDEGDLNLPIPAFLVLCYLDLPAQLKRCFTYLSLFPKGYEFKQKDVILLWMAQGFLQNSNSKSNDKSMEDIGDEYFGYLIMRSFLQPFGSGVSFTMHNLVHDLASYAFGESYKHHLSYSRSTQDFPESFFDKHRKLLRSILPINLPLEXAPSHFRPLELEKIIWQLNPQVFRTLSLSHYDITNLPASIGRLSHLCYLDLSYTALQALPDSVCDLLNLQTLMLTNCSSLTSFPPRMCNLINLHCLDVRDSGVQEMPLKMHKMTGLRTLTDFIISNKESRFIDLAGLSNLKTLTISKLENVAYAXDASNVKLKEKKNLDDLMLQWGNGEDGNGNGMEVLENLEPHRGLKRLTIEYYGGARFPNWLGDPSYWALQLVDLRHCGNCNSLPTLGLLPVLKDLFIEGFTKVSSIGPEFYGVMTASHKPFQYLETLQFWDMLEWKEWNLLEGIEFPHLIELYIIRCPKLVRNLPKQLPSLQKLEISGCYDLVAPLPKVSNGCEVFVHDSNEILMRSSVKIHSQTSFRRQVVISEEVQEITPQSYSGFPSXKYTIGSSVSEIEEIAHEERMESEFTRNRLPPKPVSLGTTRIPKLQELSSGLASQQVQADTPSIKQQKDPQSSVAKADIPVTTQASFLPLTDMPNTTTKVETSPTQDFDDQRSSFEILKVSSISQLMSLPPKLHSLKIERCESLEVLPGDLLGGLPVLKELYLISCSSLRSFPCPASLTTLYIRNCRRLEFPPSLESREKLSFLHHLFIGNSCDSLTTLTLNLFPELKILCIWGCTNLLSFYITWEFGGDIESLESLEIRDCPELRFFPDEELHTPNLASMFISNCKNLNRLPNSMNSVKSLFLNRCPHIESFPFGGLPSSLTLLSIAYCDKLTPQKDWGLENIESLTHFEIEGGCMGMESFPEEKLLPRNIISLRISTLKSLRKLDYKGFQHLNALQTLEISCCDMLRSLPEQGLPSSLNHLCILECSVLTPRLKPKTGKDWHKVARIPHIQIDDQVLS

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00538	117622	121821	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000538s00027559.1	PF00931.17	NB-ARC	180	457	6.20E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.617
SRR1783600	control	0.588
SRR1783602	moderate drought stress	0.700
SRR1811619	moderate drought stress	0.721

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.052
DRR006520	Root Summer glycyrrhizin high producing strain	0.051
DRR006521	Root Winter glycyrrhizin high producing strain	0.027
DRR006522	Root Winter glycyrrhizin high producing strain	0.026
DRR006523	Root Summer glycyrrhizin low producing strain	0.208
DRR006524	Root Summer glycyrrhizin low producing strain	0.210
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.118
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.089

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.174
SRR2868004	Drought Stress (root)	3.297
SRR2967015	Control (root)	2.856

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.164
SRR9715740	Leaf	3.329
SRR9715741	Leaf	2.721
SRR9715739	Root	0.072
SRR9715742	Root	0.530
SRR9715743	Root	0.472

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.069
SRR8749028	MeJA induced 9h	0.048
SRR8749029	MeJA induced 9h	0.021
SRR8749030	Uninduced	0.159
SRR8749031	Uninduced	0.055
SRR8749032	Uninduced	0.027

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.549
SRR8400027	Control - Root	1.061