Gene detail information of Glyur000537s00024613 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17450.1 | 4.00E-50 | Heavy metal transport/detoxification superfamily protein |
| NR | XP_004492985.1 | 4.96E-94 | PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] |
| Swissprot | tr|Q9SZN7|HIP26_ARATH | 6.00E-45 | Heavy metal-associated isoprenylated plant protein 26 (Precursor) |
| trEMBL | tr|G7KW42|G7KW42_MEDTR | 3.00E-91 | Heavy metal transport/detoxification superfamily protein {ECO:0000313|EMBL:AES80642.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00537 | 100785 | 103330 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000537s00024613.1 | PF00403.21 | HMA | 31 | 86 | 5.50E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.935 |
| SRR1783600 | control | 3.012 |
| SRR1783602 | moderate drought stress | 4.069 |
| SRR1811619 | moderate drought stress | 3.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.037 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.100 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.032 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.162 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.995 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.837 |
| SRR2868004 | Drought Stress (root) | 14.090 |
| SRR2967015 | Control (root) | 7.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.681 |
| SRR9715740 | Leaf | 7.730 |
| SRR9715741 | Leaf | 2.741 |
| SRR9715739 | Root | 0.494 |
| SRR9715742 | Root | 6.727 |
| SRR9715743 | Root | 4.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.838 |
| SRR8400027 | Control - Root | 11.038 |