Gene detail information of Glyur000536s00018924 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15802.1 | 2.00E-16 | heat shock factor binding protein |
| NR | KHN20412.1 | 4.38E-34 | hypothetical protein glysoja_039710, partial [Glycine soja] |
| trEMBL | tr|I3T9L3|I3T9L3_LOTJA | 1.00E-29 | Uncharacterized protein {ECO:0000313|EMBL:AFK49205.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00536 | 75471 | 77697 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000536s00018924.1 | PF06825.7 | HSBP1 | 51 | 76 | 4.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.097 |
| SRR1783600 | control | 22.043 |
| SRR1783602 | moderate drought stress | 14.092 |
| SRR1811619 | moderate drought stress | 13.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.667 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.854 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.881 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.759 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.609 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.456 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.112 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 115.118 |
| SRR2868004 | Drought Stress (root) | 72.274 |
| SRR2967015 | Control (root) | 69.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 51.089 |
| SRR9715740 | Leaf | 41.728 |
| SRR9715741 | Leaf | 44.548 |
| SRR9715739 | Root | 38.870 |
| SRR9715742 | Root | 27.746 |
| SRR9715743 | Root | 31.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.452 |
| SRR8749028 | MeJA induced 9h | 18.810 |
| SRR8749029 | MeJA induced 9h | 36.977 |
| SRR8749030 | Uninduced | 13.284 |
| SRR8749031 | Uninduced | 11.760 |
| SRR8749032 | Uninduced | 16.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 97.836 |
| SRR8400027 | Control - Root | 103.413 |