Gene detail information of Glyur000535s00027360 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27070.1 | 5.00E-94 | 5'-AMP-activated protein kinase-related |
| NR | AES96530.2 | 0 | carbohydrate-binding module family 48 protein [Medicago truncatula] |
| COG | YP_002762143.1 | 6.00E-06 | hypothetical protein GAU_2631 [Gemmatimonas aurantiaca T-27] |
| Swissprot | tr|Q944A6|SNF4_ARATH | 2.00E-10 | Sucrose nonfermenting 4-like protein |
| trEMBL | tr|G7K9Q9|G7K9Q9_MEDTR | 0 | Carbohydrate-binding module family 48 protein {ECO:0000313|EMBL:AES96530.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00535 | 49507 | 56960 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.891 |
| SRR1783600 | control | 2.967 |
| SRR1783602 | moderate drought stress | 2.893 |
| SRR1811619 | moderate drought stress | 2.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.876 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.104 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.194 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.044 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.881 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.737 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.112 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.934 |
| SRR2868004 | Drought Stress (root) | 6.507 |
| SRR2967015 | Control (root) | 6.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.184 |
| SRR9715740 | Leaf | 4.358 |
| SRR9715741 | Leaf | 4.293 |
| SRR9715739 | Root | 0.641 |
| SRR9715742 | Root | 2.998 |
| SRR9715743 | Root | 2.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.900 |
| SRR8749028 | MeJA induced 9h | 6.096 |
| SRR8749029 | MeJA induced 9h | 4.953 |
| SRR8749030 | Uninduced | 2.009 |
| SRR8749031 | Uninduced | 1.432 |
| SRR8749032 | Uninduced | 1.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.201 |
| SRR8400027 | Control - Root | 7.474 |