Gene detail information of Glyur000534s00028674 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34680.1 | 0 | Outer arm dynein light chain 1 protein |
| NR | XP_003547568.1 | 0 | PREDICTED: uncharacterized protein LOC100807099 [Glycine max] |
| Swissprot | tr|F4IIU4|AIR9_ARATH | 0 | 187-kDa microtubule-associated protein AIR9 |
| trEMBL | tr|K7MCF9|K7MCF9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G22384.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00534 | 47542 | 67696 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.931 |
| SRR1783600 | control | 18.062 |
| SRR1783602 | moderate drought stress | 17.518 |
| SRR1811619 | moderate drought stress | 17.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.518 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.844 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.821 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.783 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.748 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.010 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.145 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.367 |
| SRR2868004 | Drought Stress (root) | 47.929 |
| SRR2967015 | Control (root) | 43.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.851 |
| SRR9715740 | Leaf | 15.886 |
| SRR9715741 | Leaf | 10.043 |
| SRR9715739 | Root | 12.428 |
| SRR9715742 | Root | 31.188 |
| SRR9715743 | Root | 29.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 39.559 |
| SRR8749028 | MeJA induced 9h | 21.669 |
| SRR8749029 | MeJA induced 9h | 34.275 |
| SRR8749030 | Uninduced | 7.187 |
| SRR8749031 | Uninduced | 8.334 |
| SRR8749032 | Uninduced | 11.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 54.375 |
| SRR8400027 | Control - Root | 59.263 |