Gene detail information of Glyur000533s00015053.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G06070.12.00E-40Basic-leucine zipper (bZIP) transcription factor family protein
NRCBI36720.31.83E-57unnamed protein product [Vitis vinifera]
Swissprottr|Q04088|POF21_ARATH1.00E-44Probable transcription factor PosF21
trEMBLtr|M5XCD0|M5XCD0_PRUPE1.00E-57Uncharacterized protein {ECO:0000313|EMBL:EMJ23579.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00533112368116179-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000533s00015053.3PF00170.16bZIP_11281761.50E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control56.758
SRR1783600control57.704
SRR1783602moderate drought stress34.228
SRR1811619moderate drought stress34.123

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.853
DRR006520Root Summer glycyrrhizin high producing strain7.158
DRR006521Root Winter glycyrrhizin high producing strain12.274
DRR006522Root Winter glycyrrhizin high producing strain11.155
DRR006523Root Summer glycyrrhizin low producing strain19.400
DRR006524Root Summer glycyrrhizin low producing strain19.396
DRR006525Leaf Summer glycyrrhizin high producing strain3.672
DRR006526Leaf Summer glycyrrhizin high producing strain3.127

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)34.714
SRR2868004Drought Stress (root)36.688
SRR2967015Control (root)36.113

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf10.609
SRR9715740Leaf17.989
SRR9715741Leaf11.358
SRR9715739Root0.784
SRR9715742Root3.570
SRR9715743Root2.702

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h72.815
SRR8749028MeJA induced 9h44.862
SRR8749029MeJA induced 9h58.521
SRR8749030Uninduced44.836
SRR8749031Uninduced58.119
SRR8749032Uninduced35.386

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root29.660
SRR8400027Control - Root26.819

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved