Gene detail information of Glyur000533s00015033 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05960.1 | 0 | ARM repeat superfamily protein |
| NR | XP_004507331.1 | 0 | PREDICTED: uncharacterized protein LOC101496023 isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7LT68|K7LT68_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05671.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00533 | 2953 | 12987 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.070 |
| SRR1783600 | control | 19.418 |
| SRR1783602 | moderate drought stress | 13.115 |
| SRR1811619 | moderate drought stress | 12.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.236 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.444 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.172 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.086 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.474 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.196 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.548 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.706 |
| SRR2868004 | Drought Stress (root) | 18.239 |
| SRR2967015 | Control (root) | 20.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.115 |
| SRR9715740 | Leaf | 3.293 |
| SRR9715741 | Leaf | 9.173 |
| SRR9715739 | Root | 7.017 |
| SRR9715742 | Root | 14.284 |
| SRR9715743 | Root | 12.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.807 |
| SRR8749028 | MeJA induced 9h | 18.543 |
| SRR8749029 | MeJA induced 9h | 33.023 |
| SRR8749030 | Uninduced | 8.414 |
| SRR8749031 | Uninduced | 9.004 |
| SRR8749032 | Uninduced | 9.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.759 |
| SRR8400027 | Control - Root | 39.354 |