Gene detail information of Glyur000532s00020775 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G21550.1 | 3.00E-56 | DUF679 domain membrane protein 2 |
| NR | XP_004486087.1 | 4.11E-114 | PREDICTED: uncharacterized protein LOC101506121 [Cicer arietinum] |
| trEMBL | tr|G7IFN3|G7IFN3_MEDTR | 6.00E-112 | Transmembrane protein, putative {ECO:0000313|EMBL:AES64308.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00532 | 140782 | 141378 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000532s00020775.1 | PF05078.7 | DUF679 | 25 | 184 | 7.60E-61 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.066 |
| SRR1783600 | control | 5.165 |
| SRR1783602 | moderate drought stress | 4.455 |
| SRR1811619 | moderate drought stress | 4.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.288 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.780 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.187 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.182 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.011 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.790 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.495 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.905 |
| SRR2868004 | Drought Stress (root) | 10.361 |
| SRR2967015 | Control (root) | 16.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.861 |
| SRR9715741 | Leaf | 0.109 |
| SRR9715739 | Root | 5.948 |
| SRR9715742 | Root | 9.709 |
| SRR9715743 | Root | 10.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.222 |
| SRR8749028 | MeJA induced 9h | 0.941 |
| SRR8749029 | MeJA induced 9h | 2.172 |
| SRR8749030 | Uninduced | 0.284 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.451 |
| SRR8400027 | Control - Root | 16.970 |