Gene detail information of Glyur000532s00020753 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007152385.1 | 4.60E-14 | hypothetical protein PHAVU_004G1255000g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7C2L6|V7C2L6_PHAVU | 2.00E-14 | Uncharacterized protein {ECO:0000313|EMBL:ESW24379.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00532 | 36156 | 37362 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000532s00020753.1 | PF03108.10 | DBD_Tnp_Mut | 122 | 181 | 6.80E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.468 |
| SRR1783600 | control | 3.639 |
| SRR1783602 | moderate drought stress | 4.038 |
| SRR1811619 | moderate drought stress | 3.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.358 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.021 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.795 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.410 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.561 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.943 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.708 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.022 |
| SRR2868004 | Drought Stress (root) | 1.144 |
| SRR2967015 | Control (root) | 1.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.742 |
| SRR9715740 | Leaf | 0.445 |
| SRR9715741 | Leaf | 0.895 |
| SRR9715739 | Root | 1.366 |
| SRR9715742 | Root | 2.014 |
| SRR9715743 | Root | 1.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.875 |
| SRR8749028 | MeJA induced 9h | 1.511 |
| SRR8749029 | MeJA induced 9h | 0.870 |
| SRR8749030 | Uninduced | 0.513 |
| SRR8749031 | Uninduced | 0.122 |
| SRR8749032 | Uninduced | 0.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.753 |
| SRR8400027 | Control - Root | 1.823 |