Gene detail information of Glyur000531s00022817.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G36930.1 | 3.00E-44 | Disease resistance protein (TIR-NBS-LRR class) family |
| NR | XP_004489498.1 | 0 | PREDICTED: uncharacterized protein LOC101494533 [Cicer arietinum] |
| Swissprot | tr|Q40392|TMVRN_NICGU | 7.00E-22 | TMV resistance protein N |
| trEMBL | tr|A0A072UH08|A0A072UH08_MEDTR | 0 | Disease resistance protein (TIR-NBS-LRR class) {ECO:0000313|EMBL:KEH25085.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00531 | 83699 | 113039 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01547 | kdpB | EC:3.6.3.12 | Two-component system | map02020 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.504 |
| SRR1783600 | control | 0.125 |
| SRR1783602 | moderate drought stress | 0.140 |
| SRR1811619 | moderate drought stress | 0.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.713 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.632 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.731 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.649 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.197 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.609 |
| SRR2868004 | Drought Stress (root) | 0.649 |
| SRR2967015 | Control (root) | 0.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.196 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.181 |
| SRR9715739 | Root | 0.236 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.931 |
| SRR8749028 | MeJA induced 9h | 0.938 |
| SRR8749029 | MeJA induced 9h | 1.002 |
| SRR8749030 | Uninduced | 0.207 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.648 |
| SRR8400027 | Control - Root | 3.766 |