Gene detail information of Glyur000529s00019353 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006385751.1 | 6.78E-24 | hypothetical protein POPTR_0003s12020g, partial [Populus trichocarpa] |
| trEMBL | tr|K3YLV2|K3YLV2_SETIT | 3.00E-27 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si015228m} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00529 | 108038 | 108799 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.102 |
| SRR1783600 | control | 0.102 |
| SRR1783602 | moderate drought stress | 0.211 |
| SRR1811619 | moderate drought stress | 0.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.668 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.607 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.383 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.320 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.221 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.801 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.228 |
| SRR2868004 | Drought Stress (root) | 2.040 |
| SRR2967015 | Control (root) | 1.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.274 |
| SRR9715740 | Leaf | 4.304 |
| SRR9715741 | Leaf | 5.915 |
| SRR9715739 | Root | 1.647 |
| SRR9715742 | Root | 2.631 |
| SRR9715743 | Root | 2.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.304 |
| SRR8749028 | MeJA induced 9h | 11.060 |
| SRR8749029 | MeJA induced 9h | 7.156 |
| SRR8749030 | Uninduced | 2.951 |
| SRR8749031 | Uninduced | 0.581 |
| SRR8749032 | Uninduced | 2.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.941 |
| SRR8400027 | Control - Root | 0.427 |