Gene detail

Gene detail information of Glyur000529s00019337

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G52060.1	2.00E-87	BCL-2-associated athanogene 1
NR	XP_004496603.1	0	PREDICTED: BAG family molecular chaperone regulator 1-like [Cicer arietinum]
Swissprot	tr\|Q0WUQ1\|BAG1_ARATH	4.00E-115	BAG family molecular chaperone regulator 1
trEMBL	tr\|Q2PER1\|Q2PER1_TRIPR	3.00E-180	Putative uncharacterized protein {ECO:0000313\|EMBL:BAE71291.1}

Sequence

Transcript Sequence

>Glyur000529s00019337.1
GTTAGCTGGCCACTCGTTTTTATATTCATTTTGATTTTGATTTTCTCCTACTTTCACTTTCTTCTTCACCGATTCCTCCAGAACTGCAAGAGGCAGGGAGAGAAAAATCAATTCCTCATAATTGGAATTGTTTTTTTTATCTCTCTGGATTTTGATTTTGACTTCGCATTGATTTACCCTCTTTACAACAATCACNGCCTCAGATTTTCTTTTGTTCTCTGTCTCAGATTACGCCAGAAAATTCTCACACTCCCGCATAAATCCACATTTTGCTGCAAAGATCAGTGCTTTCAGCTTTTGCAGAGTTGGTGAAAGAGAAAGAGTGAGAAGAAGGAGAAAATGATGAAGATGAGGAACATGACAAATGGAGGTTCGGGAACCGAGCCACGAGCTATGGATTGGGAGATGAGACCCGGAGGAATGCTGGTTCAGCGACGAACCGCTGACTCGGATCGGAACTCAGTGCCGCCGCCACCGACCATTAGAGTTCGCGTTAAGTATGGTTCAACCTACCATGAAGTCAACATTAGTTCCCAAGCTACATTTGGGGAATTGAAGAAAATGCTGTCTGGGCCAACTGGGTTGCACCACCAAGACCAAAAGCTATTTTACAAAGACAAGGAGAGGGATTCAAAGGCGTTCCTTGACATGGTAGGAGTCAAAGACAAATCCAAGTTGGTGCTGATGGAGGACCCTATTAGTCAAGAGAAGAGGTACTTGGAAATGAGGAAGAATGCCAAGATNGAGAGAGCTGCAAAATCTATCTCAGAAATCAGCTTGCAAGTAGATAGACTTGCAGGACAGGTGTCTGCTCTTGAATCAATTATTGGCAAGGGTNGGAAAGTTGCAGAGTCAGATGTGCTTAGTTTGATTGAGCAATTGATGAATCAACTGCTTAAATTGGATGGGATAATGGCTGATGGGGATGTTAAATTGCAGAGGAAAATGCAGGTAAAAAGAGTTCAAAAGTATGTTGAAACTCTGGATATGTTGAAAATTAAGAATTCTATGCCCAGTACTAATGGTCAGGCCCCAGTGAAGAAGCCTCATCAACAAAAGCATTCAAATGGGCAAAGACTGGCTCCAATTCAAGAGCAACCACAAAGTCTATCAAATGGGCATCATAGATTAGCACCAAATGTGGAGCAGCATAAACAACAACAACAAAGGAACTCAAATGGGAACTCTCTAGTATTTCAGCAGCAGCAGCAACCCTCTAGGCATTCTACCTCTGAAGTTGTAGTTACTACAAAATGGGAGACATTTGATTCTCTACCACCATTAATTCCTGTCACATCCACATCCTCATCCAGCTCAGGGCACAATAATTCGGTTCATCCAAAGTTCAATTGGGAATTCTTCGACTAAATAGCTAGCGTACCACGTGTTTGTAATTGTGTGGATGTGAGTTGGCTTTGTCTTCCACTTGGATCGAGTGTGTTATATTGTTTGTTATACATTCTTTTCTGTATTTACTATTTAGATTTGTTTAGCAACCCCCCTTTAGTCTGTCATTTACTTCCCCCGGGAATAAATG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00529	758	3126	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005515 protein binding

GO:0051087 chaperone binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000529s00019337.1	PF02179.11	BAG	142	219	1.50E-17
Glyur000529s00019337.2	PF02179.11	BAG	142	219	1.50E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	57.625
SRR1783600	control	57.986
SRR1783602	moderate drought stress	60.542
SRR1811619	moderate drought stress	60.635

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	46.289
DRR006520	Root Summer glycyrrhizin high producing strain	45.303
DRR006521	Root Winter glycyrrhizin high producing strain	31.923
DRR006522	Root Winter glycyrrhizin high producing strain	30.986
DRR006523	Root Summer glycyrrhizin low producing strain	64.611
DRR006524	Root Summer glycyrrhizin low producing strain	64.551
DRR006525	Leaf Summer glycyrrhizin high producing strain	24.575
DRR006526	Leaf Summer glycyrrhizin high producing strain	24.744

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	62.925
SRR2868004	Drought Stress (root)	76.565
SRR2967015	Control (root)	48.801

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	48.763
SRR9715740	Leaf	34.418
SRR9715741	Leaf	37.581
SRR9715739	Root	18.656
SRR9715742	Root	85.976
SRR9715743	Root	72.790

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	89.011
SRR8749028	MeJA induced 9h	151.344
SRR8749029	MeJA induced 9h	166.194
SRR8749030	Uninduced	241.034
SRR8749031	Uninduced	177.836
SRR8749032	Uninduced	104.392

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	47.639
SRR8400027	Control - Root	58.658